Gene detail information of Glyur000309s00018415 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004516099.1 | 1.31E-44 | PREDICTED: vegetative cell wall protein gp1-like [Cicer arietinum] |
| trEMBL | tr|A0A072UXB9|A0A072UXB9_MEDTR | 8.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:KEH34086.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00309 | 59187 | 59813 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.302 |
| SRR1783600 | control | 46.134 |
| SRR1783602 | moderate drought stress | 18.419 |
| SRR1811619 | moderate drought stress | 17.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.689 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.502 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.992 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.003 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.773 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 74.190 |
| SRR2868004 | Drought Stress (root) | 32.652 |
| SRR2967015 | Control (root) | 44.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.225 |
| SRR9715740 | Leaf | 1.675 |
| SRR9715741 | Leaf | 4.630 |
| SRR9715739 | Root | 71.841 |
| SRR9715742 | Root | 20.769 |
| SRR9715743 | Root | 21.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 78.147 |
| SRR8749028 | MeJA induced 9h | 38.468 |
| SRR8749029 | MeJA induced 9h | 23.584 |
| SRR8749030 | Uninduced | 0.114 |
| SRR8749031 | Uninduced | 0.148 |
| SRR8749032 | Uninduced | 0.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 50.226 |
| SRR8400027 | Control - Root | 39.629 |