Gene detail information of Glyur000309s00018414 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| trEMBL | tr|F6I554|F6I554_VITVI | 6.00E-09 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB62009.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00309 | 59176 | 59562 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.108 |
| SRR1783600 | control | 5.886 |
| SRR1783602 | moderate drought stress | 4.529 |
| SRR1811619 | moderate drought stress | 4.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.381 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.718 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.294 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.105 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.063 |
| SRR2868004 | Drought Stress (root) | 18.576 |
| SRR2967015 | Control (root) | 24.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.839 |
| SRR9715740 | Leaf | 1.457 |
| SRR9715741 | Leaf | 3.640 |
| SRR9715739 | Root | 35.764 |
| SRR9715742 | Root | 6.495 |
| SRR9715743 | Root | 15.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.524 |
| SRR8749028 | MeJA induced 9h | 15.921 |
| SRR8749029 | MeJA induced 9h | 9.882 |
| SRR8749030 | Uninduced | 0.027 |
| SRR8749031 | Uninduced | 0.055 |
| SRR8749032 | Uninduced | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.499 |
| SRR8400027 | Control - Root | 19.004 |