Gene detail information of Glyur000308s00025274 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44230.1 | 1.00E-177 | Plant protein of unknown function (DUF946) |
| NR | XP_003532908.1 | 0 | PREDICTED: uncharacterized protein LOC100792266 [Glycine max] |
| trEMBL | tr|I1KTW1|I1KTW1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G17410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00308 | 199449 | 201259 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000308s00025274.1 | PF06101.6 | DUF946 | 15 | 548 | 8.90E-246 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.787 |
| SRR1783600 | control | 2.788 |
| SRR1783602 | moderate drought stress | 2.366 |
| SRR1811619 | moderate drought stress | 2.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.394 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.382 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.066 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.067 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.426 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.877 |
| SRR2868004 | Drought Stress (root) | 55.397 |
| SRR2967015 | Control (root) | 56.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.286 |
| SRR9715740 | Leaf | 11.577 |
| SRR9715741 | Leaf | 23.423 |
| SRR9715739 | Root | 0.309 |
| SRR9715742 | Root | 3.096 |
| SRR9715743 | Root | 1.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 1.171 |
| SRR8749029 | MeJA induced 9h | 0.094 |
| SRR8749030 | Uninduced | 3.168 |
| SRR8749031 | Uninduced | 4.921 |
| SRR8749032 | Uninduced | 1.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.597 |
| SRR8400027 | Control - Root | 38.560 |