Gene detail information of Glyur000308s00025270 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28420.1 | 1.00E-05 | homeobox-1 |
| NR | XP_004485835.1 | 6.79E-07 | PREDICTED: uncharacterized protein LOC101510178 isoform X1 [Cicer arietinum] |
| trEMBL | tr|A2Q504|A2Q504_MEDTR | 3.00E-07 | DDT; Homeodomain-related {ECO:0000313|EMBL:ABN08705.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00308 | 186428 | 194550 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.291 |
| SRR1783600 | control | 1.510 |
| SRR1783602 | moderate drought stress | 2.231 |
| SRR1811619 | moderate drought stress | 2.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.365 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.138 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.779 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.975 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.672 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.114 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.993 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.546 |
| SRR2868004 | Drought Stress (root) | 18.035 |
| SRR2967015 | Control (root) | 21.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.558 |
| SRR9715740 | Leaf | 1.338 |
| SRR9715741 | Leaf | 1.091 |
| SRR9715739 | Root | 0.710 |
| SRR9715742 | Root | 1.476 |
| SRR9715743 | Root | 1.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.896 |
| SRR8749028 | MeJA induced 9h | 6.866 |
| SRR8749029 | MeJA induced 9h | 3.016 |
| SRR8749030 | Uninduced | 14.279 |
| SRR8749031 | Uninduced | 12.309 |
| SRR8749032 | Uninduced | 9.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.891 |
| SRR8400027 | Control - Root | 2.192 |