Gene detail information of Glyur000308s00025264 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79420.1 | 9.00E-148 | Protein of unknown function (DUF620) |
| NR | XP_004488554.1 | 0 | PREDICTED: uncharacterized protein LOC101508083 [Cicer arietinum] |
| trEMBL | tr|A0A072U8X6|A0A072U8X6_MEDTR | 0 | Plant/T8K14-16 protein {ECO:0000313|EMBL:KEH26102.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00308 | 143497 | 147240 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000308s00025264.1 | PF04788.7 | DUF620 | 136 | 378 | 7.30E-117 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.572 |
| SRR1783600 | control | 3.614 |
| SRR1783602 | moderate drought stress | 4.175 |
| SRR1811619 | moderate drought stress | 4.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.457 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.359 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.060 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.069 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.883 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.872 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.216 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.989 |
| SRR2868004 | Drought Stress (root) | 16.278 |
| SRR2967015 | Control (root) | 15.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.351 |
| SRR9715740 | Leaf | 1.175 |
| SRR9715741 | Leaf | 1.414 |
| SRR9715739 | Root | 2.616 |
| SRR9715742 | Root | 9.318 |
| SRR9715743 | Root | 8.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.152 |
| SRR8749028 | MeJA induced 9h | 1.591 |
| SRR8749029 | MeJA induced 9h | 1.220 |
| SRR8749030 | Uninduced | 0.122 |
| SRR8749031 | Uninduced | 0.016 |
| SRR8749032 | Uninduced | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.827 |
| SRR8400027 | Control - Root | 29.008 |