Gene detail information of Glyur000307s00023025 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_010689879.1 | 5.08E-07 | PREDICTED: uncharacterized protein LOC104903532 isoform X2 [Beta vulgaris subsp. vulgaris] |
| trEMBL | tr|E0CTP9|E0CTP9_VITVI | 3.00E-06 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI21965.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00307 | 145976 | 150674 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.970 |
| SRR1783600 | control | 4.896 |
| SRR1783602 | moderate drought stress | 11.673 |
| SRR1811619 | moderate drought stress | 11.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.148 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.960 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.609 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.052 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.633 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.457 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.776 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.053 |
| SRR2868004 | Drought Stress (root) | 2.309 |
| SRR2967015 | Control (root) | 1.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.190 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.076 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.074 |
| SRR9715743 | Root | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.167 |
| SRR8749028 | MeJA induced 9h | 2.529 |
| SRR8749029 | MeJA induced 9h | 2.272 |
| SRR8749030 | Uninduced | 2.684 |
| SRR8749031 | Uninduced | 2.412 |
| SRR8749032 | Uninduced | 1.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.929 |
| SRR8400027 | Control - Root | 0.903 |