Gene detail information of Glyur000307s00023021 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65900.1 | 1.00E-136 | |
| NR | XP_004503097.1 | 0 | PREDICTED: uncharacterized protein LOC101491890 isoform X1 [Cicer arietinum] |
| COG | YP_007096900.1 | 1.00E-16 | ABC-type Fe3+-hydroxamate transport system, periplasmic component [Chamaesiphon minutus PCC 6605] |
| trEMBL | tr|G7J7Z9|G7J7Z9_MEDTR | 0 | Plant/F12P19-7 protein {ECO:0000313|EMBL:AES70893.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00307 | 122814 | 127421 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.676 |
| SRR1783600 | control | 6.428 |
| SRR1783602 | moderate drought stress | 4.800 |
| SRR1811619 | moderate drought stress | 4.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.386 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.808 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.348 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.411 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.134 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.873 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.182 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.107 |
| SRR2868004 | Drought Stress (root) | 7.950 |
| SRR2967015 | Control (root) | 9.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.637 |
| SRR9715740 | Leaf | 0.613 |
| SRR9715741 | Leaf | 1.390 |
| SRR9715739 | Root | 1.112 |
| SRR9715742 | Root | 5.673 |
| SRR9715743 | Root | 5.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.351 |
| SRR8749028 | MeJA induced 9h | 0.090 |
| SRR8749029 | MeJA induced 9h | 0.042 |
| SRR8749030 | Uninduced | 0.043 |
| SRR8749031 | Uninduced | 0.128 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.216 |
| SRR8400027 | Control - Root | 29.829 |