Gene detail information of Glyur000307s00023006 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G33530.1 | 1.00E-06 | F-box family protein |
| NR | XP_006602032.1 | 0 | PREDICTED: uncharacterized protein LOC102663613 isoform X1 [Glycine max] |
| trEMBL | tr|I1MZI8|I1MZI8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G05100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00307 | 582 | 1742 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.140 |
| SRR1783600 | control | 0.095 |
| SRR1783602 | moderate drought stress | 0.033 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.187 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.185 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.909 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.857 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.677 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.328 |
| SRR2868004 | Drought Stress (root) | 0.882 |
| SRR2967015 | Control (root) | 0.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.806 |
| SRR9715740 | Leaf | 1.751 |
| SRR9715741 | Leaf | 3.316 |
| SRR9715739 | Root | 0.283 |
| SRR9715742 | Root | 2.412 |
| SRR9715743 | Root | 1.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.483 |
| SRR8749028 | MeJA induced 9h | 10.026 |
| SRR8749029 | MeJA induced 9h | 11.379 |
| SRR8749030 | Uninduced | 2.014 |
| SRR8749031 | Uninduced | 3.950 |
| SRR8749032 | Uninduced | 3.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.248 |
| SRR8400027 | Control - Root | 0.157 |