Gene detail information of Glyur000306s00014038 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10385.1 | 3.00E-36 | Vps51/Vps67 family (components of vesicular transport) protein |
| NR | XP_003541366.1 | 0 | PREDICTED: exocyst complex component EXO84B-like [Glycine max] |
| Swissprot | tr|F4I4B6|EX84A_ARATH | 7.00E-39 | Exocyst complex component EXO84A |
| trEMBL | tr|K7LZB9|K7LZB9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G18766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 190227 | 194531 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.484 |
| SRR1783600 | control | 2.521 |
| SRR1783602 | moderate drought stress | 2.779 |
| SRR1811619 | moderate drought stress | 2.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.930 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.681 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.797 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.820 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.496 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.050 |
| SRR2868004 | Drought Stress (root) | 4.940 |
| SRR2967015 | Control (root) | 4.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.158 |
| SRR9715740 | Leaf | 4.142 |
| SRR9715741 | Leaf | 6.466 |
| SRR9715739 | Root | 0.120 |
| SRR9715742 | Root | 1.134 |
| SRR9715743 | Root | 1.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.273 |
| SRR8749028 | MeJA induced 9h | 0.676 |
| SRR8749029 | MeJA induced 9h | 1.454 |
| SRR8749030 | Uninduced | 0.619 |
| SRR8749031 | Uninduced | 1.413 |
| SRR8749032 | Uninduced | 1.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.063 |
| SRR8400027 | Control - Root | 6.820 |