Gene detail information of Glyur000306s00014029


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04400.14.00E-76Ribosomal protein L14p/L23e family protein
NRXP_004296407.11.98E-95PREDICTED: 60S ribosomal protein L23-like [Fragaria vesca subsp. vesca]
COGYP_003483879.16.00E-4550S ribosomal protein L14P [Aciduliprofundum boonei T469]
Swissprottr|P49690|RL23_ARATH5.00E-9760S ribosomal protein L23
trEMBLtr|Q9ATF6|Q9ATF6_CASSA7.00E-96Ribosomal protein L17 {ECO:0000313|EMBL:AAK25758.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00306163773165306+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000306s00014029.1PF00238.14Ribosomal_L14211404.80E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control199.631
SRR1783600control200.401
SRR1783602moderate drought stress81.419
SRR1811619moderate drought stress98.865

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain309.790
DRR006520Root Summer glycyrrhizin high producing strain312.865
DRR006521Root Winter glycyrrhizin high producing strain126.456
DRR006522Root Winter glycyrrhizin high producing strain125.576
DRR006523Root Summer glycyrrhizin low producing strain227.943
DRR006524Root Summer glycyrrhizin low producing strain225.873
DRR006525Leaf Summer glycyrrhizin high producing strain106.459
DRR006526Leaf Summer glycyrrhizin high producing strain107.199

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)720.285
SRR2868004Drought Stress (root)424.462
SRR2967015Control (root)397.032

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf317.133
SRR9715740Leaf279.001
SRR9715741Leaf253.247
SRR9715739Root377.103
SRR9715742Root293.944
SRR9715743Root310.957

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h833.846
SRR8749028MeJA induced 9h114.361
SRR8749029MeJA induced 9h635.358
SRR8749030Uninduced43.293
SRR8749031Uninduced85.373
SRR8749032Uninduced136.063

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root626.102
SRR8400027Control - Root594.707

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved