Gene detail information of Glyur000306s00014027 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44000.1 | 8.00E-140 | Glutathione S-transferase family protein |
| NR | XP_004495065.1 | 0 | PREDICTED: glutathionyl-hydroquinone reductase YqjG-like [Cicer arietinum] |
| COG | YP_007121095.1 | 6.00E-117 | glutathione S-transferase [Microcoleus sp. PCC 7113] |
| trEMBL | tr|I1L8H1|I1L8H1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G04570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 161851 | 164227 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000306s00014027.1 | PF13409.1 | GST_N_2 | 132 | 235 | 3.20E-17 |
| Glyur000306s00014027.1 | PF13410.1 | GST_C_2 | 281 | 353 | 5.70E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.584 |
| SRR1783600 | control | 20.216 |
| SRR1783602 | moderate drought stress | 20.502 |
| SRR1811619 | moderate drought stress | 22.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 45.623 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.786 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.862 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.845 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.658 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.685 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.257 |
| SRR2868004 | Drought Stress (root) | 38.518 |
| SRR2967015 | Control (root) | 35.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.528 |
| SRR9715740 | Leaf | 38.587 |
| SRR9715741 | Leaf | 29.845 |
| SRR9715739 | Root | 36.354 |
| SRR9715742 | Root | 28.552 |
| SRR9715743 | Root | 26.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 100.171 |
| SRR8749028 | MeJA induced 9h | 14.469 |
| SRR8749029 | MeJA induced 9h | 78.397 |
| SRR8749030 | Uninduced | 8.104 |
| SRR8749031 | Uninduced | 14.107 |
| SRR8749032 | Uninduced | 5.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.567 |
| SRR8400027 | Control - Root | 47.482 |