Gene detail information of Glyur000306s00014024 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | CAN81929.1 | 1.82E-13 | hypothetical protein VITISV_018684 [Vitis vinifera] |
| trEMBL | tr|A5C7Y0|A5C7Y0_VITVI | 7.00E-14 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN81929.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 150572 | 150799 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 65.621 |
| SRR1783600 | control | 70.207 |
| SRR1783602 | moderate drought stress | 64.616 |
| SRR1811619 | moderate drought stress | 63.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.225 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.593 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.247 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.262 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.840 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 67.070 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.168 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.167 |
| SRR2868004 | Drought Stress (root) | 23.576 |
| SRR2967015 | Control (root) | 23.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.935 |
| SRR9715740 | Leaf | 17.252 |
| SRR9715741 | Leaf | 20.973 |
| SRR9715739 | Root | 22.023 |
| SRR9715742 | Root | 25.821 |
| SRR9715743 | Root | 21.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 79.139 |
| SRR8749028 | MeJA induced 9h | 17.151 |
| SRR8749029 | MeJA induced 9h | 78.950 |
| SRR8749030 | Uninduced | 6.993 |
| SRR8749031 | Uninduced | 5.771 |
| SRR8749032 | Uninduced | 29.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.418 |
| SRR8400027 | Control - Root | 17.326 |