Gene detail information of Glyur000306s00014023 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43970.1 | 5.00E-25 | translocase of outer membrane 22-V |
| NR | XP_007144851.1 | 5.07E-51 | hypothetical protein PHAVU_007G189500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FNC9|TOM92_ARATH | 1.00E-34 | Mitochondrial import receptor subunit TOM9-2 |
| trEMBL | tr|V7BH43|V7BH43_PHAVU | 2.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:ESW16845.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 150476 | 150787 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 77.590 |
| SRR1783600 | control | 63.685 |
| SRR1783602 | moderate drought stress | 62.647 |
| SRR1811619 | moderate drought stress | 58.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.064 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 54.234 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 36.035 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 32.898 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 58.165 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.195 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.789 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 59.159 |
| SRR2868004 | Drought Stress (root) | 51.468 |
| SRR2967015 | Control (root) | 49.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.596 |
| SRR9715740 | Leaf | 31.191 |
| SRR9715741 | Leaf | 24.196 |
| SRR9715739 | Root | 64.036 |
| SRR9715742 | Root | 44.967 |
| SRR9715743 | Root | 43.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 237.816 |
| SRR8749028 | MeJA induced 9h | 43.143 |
| SRR8749029 | MeJA induced 9h | 237.785 |
| SRR8749030 | Uninduced | 12.122 |
| SRR8749031 | Uninduced | 8.226 |
| SRR8749032 | Uninduced | 35.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.904 |
| SRR8400027 | Control - Root | 52.138 |