Gene detail information of Glyur000306s00014017 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22560.1 | 3.00E-18 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_003551826.1 | 3.76E-39 | PREDICTED: uncharacterized protein LOC100802886 [Glycine max] |
| COG | NP_269463.1 | 1.00E-10 | acetyl transferase [Streptococcus pyogenes M1 GAS] |
| trEMBL | tr|I1N563|I1N563_SOYBN | 1.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 135001 | 136132 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000306s00014017.1 | PF13302.1 | Acetyltransf_3 | 7 | 133 | 5.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.055 |
| SRR1811619 | moderate drought stress | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.184 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.023 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.231 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.188 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.275 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.084 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.353 |
| SRR9715740 | Leaf | 6.566 |
| SRR9715741 | Leaf | 1.112 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.044 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.034 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.073 |