Gene detail information of Glyur000306s00014014 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04020.1 | 4.00E-73 | |
| NR | XP_003552694.1 | 1.52E-177 | PREDICTED: uncharacterized protein LOC100788957 isoform X1 [Glycine max] |
| trEMBL | tr|K7MVD1|K7MVD1_SOYBN | 6.00E-178 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52640.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 110700 | 114535 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.379 |
| SRR1783600 | control | 2.352 |
| SRR1783602 | moderate drought stress | 1.632 |
| SRR1811619 | moderate drought stress | 1.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.671 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.131 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.074 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.930 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.529 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.880 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.621 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.314 |
| SRR2868004 | Drought Stress (root) | 3.957 |
| SRR2967015 | Control (root) | 4.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.720 |
| SRR9715740 | Leaf | 3.092 |
| SRR9715741 | Leaf | 2.060 |
| SRR9715739 | Root | 1.581 |
| SRR9715742 | Root | 1.654 |
| SRR9715743 | Root | 2.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.703 |
| SRR8749028 | MeJA induced 9h | 7.978 |
| SRR8749029 | MeJA induced 9h | 28.189 |
| SRR8749030 | Uninduced | 2.360 |
| SRR8749031 | Uninduced | 6.953 |
| SRR8749032 | Uninduced | 8.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.608 |
| SRR8400027 | Control - Root | 6.394 |