Gene detail information of Glyur000306s00014009 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65520.1 | 4.00E-71 | delta(3), delta(2)-enoyl CoA isomerase 1 |
| NR | XP_004492113.1 | 9.33E-136 | PREDICTED: probable enoyl-CoA hydratase-like [Cicer arietinum] |
| COG | YP_003300526.1 | 1.00E-31 | enoyl-CoA hydratase/isomerase [Thermomonospora curvata DSM 43183] |
| trEMBL | tr|I1N551|I1N551_SOYBN | 2.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 79433 | 80131 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000306s00014009.1 | PF00378.15 | ECH | 22 | 208 | 1.60E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.978 |
| SRR1783600 | control | 44.328 |
| SRR1783602 | moderate drought stress | 35.211 |
| SRR1811619 | moderate drought stress | 34.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.369 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.465 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.013 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.815 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.704 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.424 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.051 |
| SRR2868004 | Drought Stress (root) | 17.298 |
| SRR2967015 | Control (root) | 18.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.672 |
| SRR9715740 | Leaf | 15.282 |
| SRR9715741 | Leaf | 27.675 |
| SRR9715739 | Root | 39.848 |
| SRR9715742 | Root | 49.868 |
| SRR9715743 | Root | 52.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 118.620 |
| SRR8749028 | MeJA induced 9h | 30.519 |
| SRR8749029 | MeJA induced 9h | 70.283 |
| SRR8749030 | Uninduced | 33.985 |
| SRR8749031 | Uninduced | 75.031 |
| SRR8749032 | Uninduced | 161.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.323 |
| SRR8400027 | Control - Root | 23.065 |