Gene detail

Gene detail information of Glyur000306s00014002

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G39580.1
NR	XP_004492099.1	PREDICTED: uncharacterized protein LOC101514217 [Cicer arietinum]
trEMBL	tr\|K7MVC4\|K7MVC4_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G52520.2}

Sequence

Transcript Sequence

>Glyur000306s00014002.1
GCGCGAGTCGGTTGGTTTTCTTACCGCGTCCCTCTCCTTTTGCCATTCCGTGCGCGTTACTCTGGATATGGAAACTCTTCTCCTGCTTCTCTAGAGAGTGTGTGCGTGTGCGTGACGGTGGAGGACACCGTTGACCTGAGAGAAGCCACCACAACCATGGCGGCATCCGAGAACCACAACCCCGACCTTCCTCCCAAAACCAGAGAAGAAGGCGAACTCTCTTCTTCCGATGGTGGCGACGAAAACGTAGATGTTTCTACCGTGCAATCCACCCTTGCTGCAGGGTCTGGTTCTGTTCCTTTGGTTCAAAAAAGCACCCAAGGCGTTCAGGGTGGCTCAAATAATATACAGTTGCAAACGACCAGACAACCAACTTCGCAGAAGAGCATAAAAAAGAACCAATTACCCCCTAAATCTTCTCCATGGACTGGTCATGCAGGCACTGATAAAAATCTTGTGATAAGCTTCTCTGATGACGACAGTGGTAGTGAATTTGAAACTAAAGGTAATGCTTCCAAGTTGGATAGCAATATAAAGCGACCTAGCTCGTCCTTGGAAAAATCAAACAAGTTACAGTTACAACAAAATGCTAGAAGTTCGCACAAGGAAATGCCCAAGAGGCCGTCTTTTAGTCGCACATTTATCTCATCAATAACCAAAATTCCTGGTTCTAATTCTAAGGGTACTCGATCCTTGTCACTGGGACAAGGACCACAAGCTAGAAATGTCAATCCAATGAACAAAACTTTAGCAAGCCGAGAGCGTGGANGTGATCAAGGAGCAGTATCAAATGACAATAAACTTCAGGATTTGCGGCATCAGATTGCACTTCGCGAAAGTGAACTAAAGTTGAAGGCGGCCCAACAAAATAAGGAGTCTCCTTTAGTTTTTGGCAGGGACCAGAACGCCATGAACCTGAAAAATGACACAGCTAGGAAAAATACTCCAGTTTCCTCAGTGGCTGCACAATTAGAGCCAAAGGAACCAGATAGGAAACGCATGAAACTTGGCACATCTCTTGGTACCCCTCAAGCTGTTGGTAGTCAGCAAGAAGTTCCTGCTGTAAAATCTATATTACCATCAAAAGATTCTGTGTTGGGAAATTTTTATCCTCAGGAGAGAAACAAGGTTGATCATAACCAAAAAGAGATTCCATCATGTAGAGGAGAATCAACAACTATCATATCACAAAGGCAACCTGACAATCATCATGACAACTCATTACAAAATATGCCTTGTAGATCGAGAGGCGGTGATGTCAATTATGGTTGCAATCAGACTGAGAAGAGTAGTAGGGTGGATGACCCTTGCATGGCTTTCAACCAGAGTGCAATGCCAGCAGATTTGCCTTCTAACAGTGTGCCAAAAAATTTAGAAGCATCAAGCAATGCAGTTCTTATGAATCATAATGATAATGCAAATGTCTCCGAGTTTAGCAGCATNGATTTACAGTCGTTTTTTGGTGTGGAAGAATTGATTGACAAGGAACTGGAGGAAGCTCAAGAGCATAGGCACAGATGTGAAATTGAAGAAAGAAATGCACTTAAAGCTTATCTTAAAGCTCAGAGGTCCTTGCTTGAGGCTAATGCTCGATGCAACAATCTTTATCGCCAAAGGGAATTGTGTTCAGCGAAGTTACGATCTTTGATTTTAAACAATTCCAGCTTCTCTTGGTCTTTAGGGCAGCACCAACATCATGACGTAGGGCTTGAATACTTACCTAAACTTGGGTATGAAATACCCACATCAAGCTGTCAGAGGCAGGCTGAATATAATGTTCTTAATAATCCTAGTTTTGATTCTAATAATCGAGGCATCGATAATAGGCGTTCCGGTACTTCTTATCACCATATGACTAGAGCAAATTTAGGGTCTGAACGTTGCAATGAACCAGATGTCAGTACATCAGAGCCATTGCCTCAACAGGGTAATAATGTCATAGATGGAGTGTATTCTCCTTTGGATGAACTAGACACATCAGCTAATGAAAATGAAGAGATTTCTCTAGCTGGACATGTTTCTAATCATCTTGGTGCTGAATATCATAGAAAACAAGACTCTGAGGCCAAACAAATGGACATAGATACTGCATCAAATGCAAATTTTTCCACTGATATTCCCCAGGATTCTTTGCTTCTTGAAGCAACATTAAGGTCCGAGTTATTTGCACGATTAGGGACAAGAGCTATGAAGAGGAGTAGTCCATGTAACAACATAGAGCCTGCTGCTGAACGAGGGGCTGAAAATGAGGTTGGAAGTGAGAAAAGCCAGGTGCATCATGTTGTTGCCCCATTGTCTAGGGCAGAAGATAATGATCTTAGAGGTGTTGAGAGGCAAGAAAGGAACATCTATCTGGATTCCAATGAGATTCAAAGTCGGCAAAACACGGGTGGAAATTCTTTGAGTGCCAACTGCAGTGCTGGTTCAGGTGATCAAGGAGATTTGCCTTTTCAAGGTCATCACTCAACTAATACAATGAACATCCCACCTTTGATTTTTAGGAGTGCATTTAGTGAACTGAGAGAAATGTCTCCATTCAATTCAAAGCAATTACCAAATAAAAATAAGTTTATTTACAACTATGATGGTCAAAATGAAAATGCTGCCTGNCTCATTTCTGATGCAACAAAGTGGAACAATATGTTAGCAATCTCAACGCCTGTCACCATTGGGAATTTACTCTCAGAAGAAAGCTCTTATGGCTGCACTCCTGCAGTTGATCCATTTTGGCCGCTTTGCATGTATGAGCTCCGAGGAAAATGCAACAATGATGAGTGTCCTTGGCAGCATACTAAGGACTATGGTGATGATAGTAACATTTATCAGCACCAGCACACTGATTCTAATAATGCAGATTCTCAAGAAAGACTACCATCGCATCAACAAAATTGTAATAGTGTGACAAAATTGACCAAGAATCACAAAGCTACTATTCTGCCAACGTACCTTGTTGGTTTAGATGTTCTGAAATCGGACCAATTTGCTTATAAACCTGTTGTGGTGCATAGGAATACTCAATGCTGGCAGCAGCATTTCAGCATTACTTTAGCTACTTGGAATTTGCTACAAAATGGTTTACACGCAGATGGTCCATTATCACATGGTGCTGATGAACNCATAGAGGTCCGTGGGGCATGGAGCAAACAGTTATCTTTTCAGTGGAGAAATGGAGTTGGGACTAAGCAGGCTATTACTGATAGTGAACAAGTTGTTGAGATGGCTCTTCTTATTCTCAACCAGGAAATCAGTAAATTGCAGGGTGTAAGAAAGGCTCTATCCGTACTGTCAAAAGCTCTGGTGACTGGTGCAACATCTATGGTTCTCTGGATTGTTTATCTGCTCATTTACTATGGAAGTTTGAGGCCAAGTGAAAAGGATGACATGTTCTTGTGTGCGGTTAAGCACTGTGAAGGATCATATGTACTGTGGCTCATGTACATCAACAGTCGTAGAAAGCTTGATGATCGGTTAGCTGCCTATGATGCTGCCCTCTCAGCTCTTTGTCAGCGTGCATCTGCTGCTCCTAAGGACAGAACATATCAAAGTGCATGCATCTTAGACCTATTTCTACAGATGATGGATTGTTTATGCATGTCAGGGAATGTTGAGAAGGCCATTCAGCAAAGTTTTGGAATATTCCCAGCTACAACTGAATCTGATGATCCTCATCTTCCGTCACTCTCAGATATACTCAATTGCCTAACATTTTCTGACAAATGTGTGTTCTGGGTTTGTTGTGTTTACTTAGTTATTTACAGGAAACTGCCTGGCGCTGTAGCTCAGAAGTTTGAATGTGAGAAAGATCTCTTTGATATCGAATGGCCCTTTGTCAGTTTATTAGAAGATGATAAGGTGATGGCTGTTAAACAAATGGAAACAGCTGTTGACTCTATCGATTCTTATGTCACTGATGAATCAGTGAAAAGTGAAGTTAATCTCAAATCTGCTCAACTTTTTGCCATCAATCATCTCAGATGCATGGTTGCTCTTGATAGCCCAGAATGCTTAAGGATATTGTTGGATAAATATGTTAAATTGTACCCTTCCTGCATAGAATTGGTCCTGNTGTCAGCTCAAATTGGGAAACTGGATATTGGTGTTGATAGTTTCATGGTATTTGAGGAAGCCATTAGCAGATGGCCAAAAAAGGTTCCTGGAATCCAGTGCATTTGGAATCAATATGTTGCAAATGCCATCCATGATCGAAGAATTGATCTTGCAAAAGAGATTACAGTCCGATGGTTCCACTCTGTATGGCAAGTCCAGGACCTCCCATATGTCGGGATGGATACCGCTGACAATGGTAATTCCTGTAGCTCATTGGGGTTGGATCCAGAATTTGTTTCAGATACATTGAGTTCTGATCTTAAACAGATGGATATGACATTTGGATATCTTAATCTGTCTCTCTATAAAATTTTCCAGAATGATAAAACAGAAGCATGCATAGCTATTGACAAGGCTAGGAATACTGTCAATTTTGGAGGTGTAGAGCAATGTATGAGAAAATATGTAATGTTTCTGGTTTGTGATGCATCGAGCTTAAAGGAGGATGGTCCCAAGGGTGTTATCAAGAAGATGTTGGAGGTATATATGGATGGTTCCTCTCAGGCATTGCTAGCCCCTAGGGTACTAACAAGAAAATTTGTTAACAACATCAAGAAGCCAAGAGTACAGCATCTCATTGATAACATATTAAGTCCAGTTTCATTTGATTGTTCTCTACTGAATTTGATACTTCAATCATGGTTTGATTCATCTCTTTTACCCCAAACTGATAGTGACCAAAAACATCTGGTGGATTTTGTTGAAGGCATTATGGAGGTAGTTCCTTACAACTTTCAATTAGCTATTACTGTTTGCAAGCTATTAAGCAAGGGTTACAGTTGTTCTGATTTAAACTCAACCAGACTCTGGTTTTGGGCTTGTTCAACCCTAGTAAATGCAATTTTGGATGCCATCCCAATACCCCCAGAATATGTCTGGGTGGAAGCTGCAGAGTTTTTGCAAAATGCTATGGGCATTGAAGCAATATCCCAGAGGTTTTATAGAAAGGCTCTATCGGTGTATCCATTTTCCATTATGTTGTGGAAATGTTTCTGTAAGCTATATAAGACCATTGGAGATGTGAACGATGTTGTTGAAGCTGCAAAAGAGAGGGGTATTAACCTTGATTAAATTTAGCAACTGATTGAATGTCAGATTGGTAGGACCAACATATTTGCTTGCGCGTGGAAACTTATGGTCTAGTTTTGCTTCTATCACAAGGAGGCCTCAACATGCAGAAGTTTTTTGTATTCAATATTAGAATTAGAATACCTCCACATATCCGGAAGCAGTTCCAATGACACACAAGTTTTTTGAGTTCGAGAGTTGAACTGGCATCCAACTTGTACAGGTAAGCAATGTCCAGTGACTTGTTAGGAATATACTACATGAGTGGGCTGGGAAAAGTTTAGGATAGTGGATCTTCCCTTCTGCTGTCTCCATTTTTTGTTTTCCATTTCTCCCCAACTTTCTTTTCTNACATCCAT

Protein Sequence

>Glyur000306s00014002.1
MAASENHNPDLPPKTREEGELSSSDGGDENVDVSTVQSTLAAGSGSVPLVQKSTQGVQGGSNNIQLQTTRQPTSQKSIKKNQLPPKSSPWTGHAGTDKNLVISFSDDDSGSEFETKGNASKLDSNIKRPSSSLEKSNKLQLQQNARSSHKEMPKRPSFSRTFISSITKIPGSNSKGTRSLSLGQGPQARNVNPMNKTLASRERGXDQGAVSNDNKLQDLRHQIALRESELKLKAAQQNKESPLVFGRDQNAMNLKNDTARKNTPVSSVAAQLEPKEPDRKRMKLGTSLGTPQAVGSQQEVPAVKSILPSKDSVLGNFYPQERNKVDHNQKEIPSCRGESTTIISQRQPDNHHDNSLQNMPCRSRGGDVNYGCNQTEKSSRVDDPCMAFNQSAMPADLPSNSVPKNLEASSNAVLMNHNDNANVSEFSSXDLQSFFGVEELIDKELEEAQEHRHRCEIEERNALKAYLKAQRSLLEANARCNNLYRQRELCSAKLRSLILNNSSFSWSLGQHQHHDVGLEYLPKLGYEIPTSSCQRQAEYNVLNNPSFDSNNRGIDNRRSGTSYHHMTRANLGSERCNEPDVSTSEPLPQQGNNVIDGVYSPLDELDTSANENEEISLAGHVSNHLGAEYHRKQDSEAKQMDIDTASNANFSTDIPQDSLLLEATLRSELFARLGTRAMKRSSPCNNIEPAAERGAENEVGSEKSQVHHVVAPLSRAEDNDLRGVERQERNIYLDSNEIQSRQNTGGNSLSANCSAGSGDQGDLPFQGHHSTNTMNIPPLIFRSAFSELREMSPFNSKQLPNKNKFIYNYDGQNENAAXLISDATKWNNMLAISTPVTIGNLLSEESSYGCTPAVDPFWPLCMYELRGKCNNDECPWQHTKDYGDDSNIYQHQHTDSNNADSQERLPSHQQNCNSVTKLTKNHKATILPTYLVGLDVLKSDQFAYKPVVVHRNTQCWQQHFSITLATWNLLQNGLHADGPLSHGADEXIEVRGAWSKQLSFQWRNGVGTKQAITDSEQVVEMALLILNQEISKLQGVRKALSVLSKALVTGATSMVLWIVYLLIYYGSLRPSEKDDMFLCAVKHCEGSYVLWLMYINSRRKLDDRLAAYDAALSALCQRASAAPKDRTYQSACILDLFLQMMDCLCMSGNVEKAIQQSFGIFPATTESDDPHLPSLSDILNCLTFSDKCVFWVCCVYLVIYRKLPGAVAQKFECEKDLFDIEWPFVSLLEDDKVMAVKQMETAVDSIDSYVTDESVKSEVNLKSAQLFAINHLRCMVALDSPECLRILLDKYVKLYPSCIELVLXSAQIGKLDIGVDSFMVFEEAISRWPKKVPGIQCIWNQYVANAIHDRRIDLAKEITVRWFHSVWQVQDLPYVGMDTADNGNSCSSLGLDPEFVSDTLSSDLKQMDMTFGYLNLSLYKIFQNDKTEACIAIDKARNTVNFGGVEQCMRKYVMFLVCDASSLKEDGPKGVIKKMLEVYMDGSSQALLAPRVLTRKFVNNIKKPRVQHLIDNILSPVSFDCSLLNLILQSWFDSSLLPQTDSDQKHLVDFVEGIMEVVPYNFQLAITVCKLLSKGYSCSDLNSTRLWFWACSTLVNAILDAIPIPPEYVWVEAAEFLQNAMGIEAISQRFYRKALSVYPFSIMLWKCFCKLYKTIGDVNDVVEAAKERGINLD

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00306	43880	54643	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000306s00014002.1	PF10650.4	zf-C3H1	859	878	1.60E-10
Glyur000306s00014002.2	PF10650.4	zf-C3H1	859	878	1.50E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.602
SRR1783600	control	9.630
SRR1783602	moderate drought stress	11.241
SRR1811619	moderate drought stress	11.131

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.379
DRR006520	Root Summer glycyrrhizin high producing strain	7.017
DRR006521	Root Winter glycyrrhizin high producing strain	11.380
DRR006522	Root Winter glycyrrhizin high producing strain	11.217
DRR006523	Root Summer glycyrrhizin low producing strain	11.249
DRR006524	Root Summer glycyrrhizin low producing strain	11.750
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.965
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.941

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.817
SRR2868004	Drought Stress (root)	22.662
SRR2967015	Control (root)	22.777

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	15.991
SRR9715740	Leaf	15.664
SRR9715741	Leaf	19.131
SRR9715739	Root	2.222
SRR9715742	Root	12.008
SRR9715743	Root	10.742

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	50.988
SRR8749028	MeJA induced 9h	24.068
SRR8749029	MeJA induced 9h	47.342
SRR8749030	Uninduced	13.536
SRR8749031	Uninduced	76.370
SRR8749032	Uninduced	52.633

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.533
SRR8400027	Control - Root	17.058