Gene detail information of Glyur000306s00013999 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35550.1 | 5.00E-68 | WUSCHEL related homeobox 13 |
| NR | XP_004492096.1 | 2.34E-147 | PREDICTED: WUSCHEL-related homeobox 13-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|O81788|WOX13_ARATH | 3.00E-83 | WUSCHEL-related homeobox 13 |
| trEMBL | tr|K7MVC2|K7MVC2_SOYBN | 2.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52491.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 31952 | 34421 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000306s00013999.1 | PF00046.24 | Homeobox | 85 | 145 | 8.90E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.009 |
| SRR1783600 | control | 40.158 |
| SRR1783602 | moderate drought stress | 38.028 |
| SRR1811619 | moderate drought stress | 38.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.835 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.006 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.355 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 56.439 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 49.114 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.332 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.073 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.780 |
| SRR2868004 | Drought Stress (root) | 34.305 |
| SRR2967015 | Control (root) | 39.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.250 |
| SRR9715740 | Leaf | 29.281 |
| SRR9715741 | Leaf | 24.519 |
| SRR9715739 | Root | 29.028 |
| SRR9715742 | Root | 17.864 |
| SRR9715743 | Root | 21.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 186.479 |
| SRR8749028 | MeJA induced 9h | 32.758 |
| SRR8749029 | MeJA induced 9h | 121.369 |
| SRR8749030 | Uninduced | 22.403 |
| SRR8749031 | Uninduced | 62.804 |
| SRR8749032 | Uninduced | 91.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.809 |
| SRR8400027 | Control - Root | 33.266 |