Gene detail information of Glyur000306s00013996 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02500.1 | 0 | heat shock cognate protein 70-1 |
| NR | KEH25731.1 | 0 | heat shock cognate 70 kDa-like protein [Medicago truncatula] |
| COG | YP_004113662.1 | 3.00E-171 | chaperone protein DnaK [Desulfurispirillum indicum S5] |
| Swissprot | tr|P09189|HSP7C_PETHY | 0 | Heat shock cognate 70 kDa protein |
| trEMBL | tr|A0A072U8M5|A0A072U8M5_MEDTR | 0 | Heat shock cognate 70 kDa-like protein {ECO:0000313|EMBL:KEH25731.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00306 | 21993 | 26920 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000306s00013996.1 | PF00012.15 | HSP70 | 10 | 584 | 9.30E-232 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.094 |
| SRR1783600 | control | 0.095 |
| SRR1783602 | moderate drought stress | 0.071 |
| SRR1811619 | moderate drought stress | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.048 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.046 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.076 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.057 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.613 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.753 |
| SRR2868004 | Drought Stress (root) | 1.548 |
| SRR2967015 | Control (root) | 0.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 125.468 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 40.217 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.234 |
| SRR9715743 | Root | 0.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.796 |
| SRR8749028 | MeJA induced 9h | 2.932 |
| SRR8749029 | MeJA induced 9h | 27.979 |
| SRR8749030 | Uninduced | 2.153 |
| SRR8749031 | Uninduced | 31.037 |
| SRR8749032 | Uninduced | 22.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.333 |
| SRR8400027 | Control - Root | 0.411 |