Gene detail information of Glyur000305s00025108 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13200.1 | 3.00E-13 | |
| NR | XP_003520920.1 | 8.37E-54 | PREDICTED: uncharacterized protein At4g13200, chloroplastic-like [Glycine max] |
| Swissprot | tr|Q8LDV3|Y4320_ARATH | 2.00E-26 | Uncharacterized protein At4g13200, chloroplastic (Precursor) |
| trEMBL | tr|K7KDF5|K7KDF5_SOYBN | 3.00E-54 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G13366.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00305 | 78715 | 84018 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.546 |
| SRR1783600 | control | 8.249 |
| SRR1783602 | moderate drought stress | 14.033 |
| SRR1811619 | moderate drought stress | 13.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.725 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.054 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.178 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.543 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.956 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.812 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.120 |
| SRR2868004 | Drought Stress (root) | 11.203 |
| SRR2967015 | Control (root) | 12.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.060 |
| SRR9715740 | Leaf | 39.729 |
| SRR9715741 | Leaf | 28.010 |
| SRR9715739 | Root | 11.788 |
| SRR9715742 | Root | 13.907 |
| SRR9715743 | Root | 12.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.376 |
| SRR8749028 | MeJA induced 9h | 5.057 |
| SRR8749029 | MeJA induced 9h | 7.402 |
| SRR8749030 | Uninduced | 1.750 |
| SRR8749031 | Uninduced | 0.013 |
| SRR8749032 | Uninduced | 1.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.957 |
| SRR8400027 | Control - Root | 22.077 |