Gene detail information of Glyur000305s00025106 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07060.1 | 5.00E-167 | NHL domain-containing protein |
| NR | XP_003622073.1 | 0 | Ribosomal protein L15 [Medicago truncatula] |
| COG | NP_485056.1 | 7.00E-19 | hypothetical protein alr1013 [Nostoc sp. PCC 7120] |
| trEMBL | tr|K7MY17|K7MY17_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G30400.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00305 | 31832 | 59106 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.866 |
| SRR1783600 | control | 1.887 |
| SRR1783602 | moderate drought stress | 2.546 |
| SRR1811619 | moderate drought stress | 2.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.952 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.845 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.662 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.400 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.721 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.584 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.391 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.882 |
| SRR2868004 | Drought Stress (root) | 2.764 |
| SRR2967015 | Control (root) | 3.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.495 |
| SRR9715740 | Leaf | 3.280 |
| SRR9715741 | Leaf | 1.789 |
| SRR9715739 | Root | 0.186 |
| SRR9715742 | Root | 2.230 |
| SRR9715743 | Root | 1.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.623 |
| SRR8749028 | MeJA induced 9h | 12.073 |
| SRR8749029 | MeJA induced 9h | 7.304 |
| SRR8749030 | Uninduced | 2.419 |
| SRR8749031 | Uninduced | 1.665 |
| SRR8749032 | Uninduced | 1.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.341 |
| SRR8400027 | Control - Root | 4.099 |