Gene detail information of Glyur000304s00027653 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15750.4 | 1.00E-04 | Transducin family protein / WD-40 repeat family protein |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00304 | 197197 | 199077 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.833 |
| SRR1783600 | control | 1.388 |
| SRR1783602 | moderate drought stress | 2.236 |
| SRR1811619 | moderate drought stress | 1.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.361 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.670 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.661 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.283 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.747 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.955 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.651 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.057 |
| SRR2868004 | Drought Stress (root) | 3.510 |
| SRR2967015 | Control (root) | 3.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.808 |
| SRR9715740 | Leaf | 0.581 |
| SRR9715741 | Leaf | 1.930 |
| SRR9715739 | Root | 0.280 |
| SRR9715742 | Root | 0.464 |
| SRR9715743 | Root | 0.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.155 |
| SRR8749028 | MeJA induced 9h | 3.740 |
| SRR8749029 | MeJA induced 9h | 3.811 |
| SRR8749030 | Uninduced | 4.469 |
| SRR8749031 | Uninduced | 1.234 |
| SRR8749032 | Uninduced | 2.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.764 |
| SRR8400027 | Control - Root | 3.995 |