Gene detail information of Glyur000304s00027652 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003530544.1 | 4.50E-09 | PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1-like [Glycine max] |
| trEMBL | tr|I1KPS3|I1KPS3_SOYBN | 2.00E-09 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G03310.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00304 | 194051 | 195071 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.715 |
| SRR1783600 | control | 2.152 |
| SRR1783602 | moderate drought stress | 2.155 |
| SRR1811619 | moderate drought stress | 1.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.537 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.102 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.344 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.269 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.359 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.489 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.157 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.596 |
| SRR2868004 | Drought Stress (root) | 1.745 |
| SRR2967015 | Control (root) | 3.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.085 |
| SRR9715740 | Leaf | 1.353 |
| SRR9715741 | Leaf | 1.510 |
| SRR9715739 | Root | 0.780 |
| SRR9715742 | Root | 1.007 |
| SRR9715743 | Root | 0.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.138 |
| SRR8749028 | MeJA induced 9h | 5.225 |
| SRR8749029 | MeJA induced 9h | 2.605 |
| SRR8749030 | Uninduced | 1.819 |
| SRR8749031 | Uninduced | 1.014 |
| SRR8749032 | Uninduced | 0.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.489 |
| SRR8400027 | Control - Root | 4.624 |