Gene detail information of Glyur000302s00029246 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05800.2 | 5.00E-15 | |
| NR | XP_008244457.1 | 1.14E-20 | PREDICTED: uncharacterized protein LOC103342602 [Prunus mume] |
| trEMBL | tr|K7KCZ2|K7KCZ2_SOYBN | 1.00E-18 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G06712.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00302 | 117391 | 118334 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000302s00029246.1 | PF12776.2 | Myb_DNA-bind_3 | 13 | 82 | 5.10E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.867 |
| SRR1783600 | control | 0.816 |
| SRR1783602 | moderate drought stress | 0.855 |
| SRR1811619 | moderate drought stress | 1.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.354 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.886 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.878 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.698 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.550 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.447 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.915 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.959 |
| SRR2868004 | Drought Stress (root) | 6.688 |
| SRR2967015 | Control (root) | 3.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.021 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.036 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.497 |
| SRR8400027 | Control - Root | 0.057 |