Gene detail

Gene detail information of Glyur000301s00024491

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G32830.1	0	phosphate transporter 1;5
NR	XP_004495320.1	0	PREDICTED: probable inorganic phosphate transporter 1-5-like [Cicer arietinum]
COG	YP_007174784.1	3.00E-86	arabinose efflux permease family protein [Caldisphaera lagunensis DSM 15908]
Swissprot	tr\|Q8GYF4\|PHT15_ARATH	0	Probable inorganic phosphate transporter 1-5
trEMBL	tr\|Q9AVQ9\|Q9AVQ9_SESRO	0	Phosphate transporter {ECO:0000313\|EMBL:CAC28219.1}

Sequence

Transcript Sequence

>Glyur000301s00024491.1
ATGGCTGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCCAAGACACAATTGTACCACTTCACTGCAATTGTGATTGCTGGAATGGGTTTTTTCACTGATGCCTATGATCTTTTCTGCATTTCCCTTGTCACCAAGTTGTTGGGTCGGATATATTACACAGATTACAACAAACCAAAGCCCGGTGTTCTTCCTCCTAATGTGCAAGCGGCTGTGACTGGTGTTGCACTTTGTGGCACTCTAGCTGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAGATGGGAAGAAAAAGGGTCTATGGCATGACTCTTATGCTCATGGTACTGTGTTCCATTGCCTCGGGGCTCTCTTTCGGATCTAGCCCAAAGGGTGTTATGGCCACGCTTTGCTTCTTCAGGTTTTGGCTTGGGTTTGGAATTGGTGGTGACTACCCTCTTTCAGCTACAATCATGTCCGAGTATGCCAACAAAAAGACACGAGGAGCATTTATTGCTGCAGTGTTTGCCATGCAGGGGTTTGGAATCATGGCTGGTGGAATAGTTGCCTTGATTGTGGCGACTGCATTTGACCACAAATACAATGTTCCTACTTATGAAGAAAACCCAGAAGCATCAATGGTGCTACCTGCCTTTGATTATGTTTGGCGTATCATTCTGATGTTCGGTGCACTCCCGGCAGCCCTTACCTACTACTGGCGTATGAAGATGCCAGAGACGGCTCGTTACACGGCCCTTGTTGCCAGGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTCTTGCAAGTGGATCTTGATGCTGAAGAGGATAAGGTGCAGCAATTGAATGAGAATCAAGACCAAAAGTTTGGTTTGTTCACCAAGGAATTCGCCAAACGCCACGGGCTGCACCTGGTGGGAACCACCACTACTTGGTTCTTGTTGGACATTGCCTTCTACAGCCAGAACCTTTTCCAAAAGGACATCTTCACCGCNGTTGGATGGATCCCTCACGCAAAAGAAATGAGTGCAATCCATGAGCTTTATAGGATTGCAAGAGCACAAACACTTATAGCACTGTGCAGCACCGTACCAGGGTACTGGTTTACAGTGGCCTTCATCGATTTAATAGGCCGTTTCGCGATCNAATTGATGGGCTTCTTCTTCATGACTGTCTTCATGTTTGCTCTGGCCATACCTTATGATCACTGGACCAAGAAAGACAACAGAATTGGGTTTCTTGTGATGTACTCCCTCACCTTCTTCTTCTCAAATTTTGGACCAAATGCCACCACATTTGTTGTGCCAGCAGAGATCTTCCCAGCAAGGCTGAGATCCACTTGTCATGGAATCTCAGCTGCTGCGGGGAAGGCGGGCGCAATTGTGGGTGCATTTGGGTTCTTATATGCTGCACAAAATAAGGACCCAAAAAAGACTGATGAAGGTTACCCACCTGGTATTGGGGTTAAGAACTCCCTTATTATGCTTGGTGTGGTCAACTTCTTAGGAATCCTATTCACCTTGTTAGTACCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTGGGGAGAATGAAGAAGATAGTGCTGCGGCTGTAGAGATCGCAGGGTCTGCAAGGACAGTGCCAGTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00301	136819	138432	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006817 phosphate ion transport

GO:0055085 transmembrane transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0005315 inorganic phosphate transmembrane transporter activity

GO:0022857 transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000301s00024491.1	PF00083.19	Sugar_tr	25	515	1.80E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.168
SRR1783600	control	13.121
SRR1783602	moderate drought stress	9.156
SRR1811619	moderate drought stress	9.086

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	28.444
DRR006520	Root Summer glycyrrhizin high producing strain	27.792
DRR006521	Root Winter glycyrrhizin high producing strain	918.013
DRR006522	Root Winter glycyrrhizin high producing strain	892.250
DRR006523	Root Summer glycyrrhizin low producing strain	56.646
DRR006524	Root Summer glycyrrhizin low producing strain	56.037
DRR006525	Leaf Summer glycyrrhizin high producing strain	227.479
DRR006526	Leaf Summer glycyrrhizin high producing strain	227.253

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	84.340
SRR2868004	Drought Stress (root)	92.761
SRR2967015	Control (root)	172.022

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	391.764
SRR9715740	Leaf	657.631
SRR9715741	Leaf	654.627
SRR9715739	Root	108.710
SRR9715742	Root	137.824
SRR9715743	Root	131.546

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	71.916
SRR8749028	MeJA induced 9h	196.269
SRR8749029	MeJA induced 9h	121.824
SRR8749030	Uninduced	78.853
SRR8749031	Uninduced	28.639
SRR8749032	Uninduced	50.456

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.567
SRR8400027	Control - Root	64.531