Gene detail

Gene detail information of Glyur000301s00024483

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G43430.1	5.00E-120	electron transfer flavoprotein beta
NR	XP_004495315.1	3.57E-173	PREDICTED: electron transfer flavoprotein subunit beta, mitochondrial-like [Cicer arietinum]
COG	YP_004301849.1	2.00E-109	electron transfer flavoprotein beta subunit-like protein [Polymorphum gilvum SL003B-26A1]
Swissprot	tr\|Q9LSW8\|ETFB_ARATH	1.00E-151	Electron transfer flavoprotein subunit beta, mitochondrial (Precursor)
trEMBL	tr\|I1LCC3\|I1LCC3_SOYBN	3.00E-173	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G33110.1}

Sequence

Transcript Sequence

>Glyur000301s00024483.1
TGGCCCCTATTGAATGAGTACAAAATAGCACAAACAACCAGACTTATACGAATTCCTACGTCTGAGATGCTCTGTGTCTATCCGTAGCCTCCAACACAGCACATGCATACACACACTGTTGTATTGTAAACTTTTTCAATATTCTTCTTCTTTCTTTCTACCTCCAGAGAAAACAAAATACACAGCAGCAGCAACCACCACCACGATGAAGATAATGGTAGCCATAAAGCGAGTGGTCGATTACGCCGTCAAAATCAGAGTCAAACCCGACAAGACAGGGGTGGTGACCCAGAACGTGAAGATGTCAATGAACCCTTTCTGCGAGATTGCCCTTGAAGAGGCACTTCGAATCAGGGAATCTGGCTTTGCCTCCGAGGTTGTGGCTGTTAGCATGGGACCCTCTCAGTGTGTGGACACTCTCAGAACTGGTCTTGCCATGGGAGCTGATAGAGGCATCCATGTGGAGGCTAATGCTTCCCTCTACCCTCTCTCTGTTGCCAAGATTTTGAGAAAGCTTGTTGAGATTGAGAAACCTGGCCTTTTGATTCTTGGCAAACAGGCCATTGATGATGATTGCAATCAAACAGGGCAGATGATAGCAGGACTTCTCAACTGGCCTCAAGGGACTTTTGCTTCAAAGGTTGTCCTTGATAAAGAGAAACAGGTAGCCACAGTGGACAGAGAGGTTGATGATGGTATTGAGACTCTGTCTTTGGACTTACCAGCAGTAATAACCACTGATCTAAGACTGAACCAACCAAGGTATGCTACTCTTCCCAACATAATGAAAGCGAAATCGAAGCCCATAAAGAAATTCACCCCGGAGGAGTTGAATGTGGAAATCAAATCTGATTTGGAGATAGTTCAAGTCACAGAACCTCCCAAGAGAAAAGCTGGGGTTATTCTTTCTTCTGTGGATGAGCTGATTGACAAACTAAAACATGAGGCTAATGTCATCTGATTATTCTCTCTACTTTGCTCTAAATCAGTTACTTCTCAGTTAACTCACCAAAGTATATATAAACAGCATTGTACCAAGATTCTGCTGATATATATGATCAAATGACACAATAAATTTAATACAGTTCCTTCTACTTTCGTGTATTTATCATCATGTCCTACATCTTCTACAACCCTGACATAAAGCATCTCTTCTTGTATAAAGTGGCATTATAAAAGTGGAAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00301	48684	52310	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0009055 electron carrier activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000301s00024483.1	PF01012.16	ETF	26	185	2.20E-36

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.664
SRR1783600	control	7.626
SRR1783602	moderate drought stress	6.503
SRR1811619	moderate drought stress	6.434

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.757
DRR006520	Root Summer glycyrrhizin high producing strain	10.353
DRR006521	Root Winter glycyrrhizin high producing strain	21.377
DRR006522	Root Winter glycyrrhizin high producing strain	21.675
DRR006523	Root Summer glycyrrhizin low producing strain	8.046
DRR006524	Root Summer glycyrrhizin low producing strain	7.593
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.591
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.748

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.133
SRR2868004	Drought Stress (root)	16.858
SRR2967015	Control (root)	19.590

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.892
SRR9715740	Leaf	9.436
SRR9715741	Leaf	12.861
SRR9715739	Root	1.769
SRR9715742	Root	3.989
SRR9715743	Root	3.869

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.637
SRR8749028	MeJA induced 9h	53.793
SRR8749029	MeJA induced 9h	54.131
SRR8749030	Uninduced	99.639
SRR8749031	Uninduced	137.287
SRR8749032	Uninduced	158.226

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.362
SRR8400027	Control - Root	13.687