Gene detail information of Glyur000301s00024476 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43990.1 | 6.00E-48 | |
| NR | KHN01054.1 | 0 | hypothetical protein glysoja_000722 [Glycine soja] |
| trEMBL | tr|K7N4P4|K7N4P4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G34480.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00301 | 22457 | 25234 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.314 |
| SRR1783600 | control | 8.265 |
| SRR1783602 | moderate drought stress | 4.867 |
| SRR1811619 | moderate drought stress | 4.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.363 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.201 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.542 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.489 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.429 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.929 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.932 |
| SRR2868004 | Drought Stress (root) | 8.677 |
| SRR2967015 | Control (root) | 9.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.157 |
| SRR9715740 | Leaf | 2.141 |
| SRR9715741 | Leaf | 2.880 |
| SRR9715739 | Root | 1.314 |
| SRR9715742 | Root | 4.846 |
| SRR9715743 | Root | 4.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.414 |
| SRR8749028 | MeJA induced 9h | 11.760 |
| SRR8749029 | MeJA induced 9h | 12.043 |
| SRR8749030 | Uninduced | 5.990 |
| SRR8749031 | Uninduced | 6.141 |
| SRR8749032 | Uninduced | 7.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.045 |
| SRR8400027 | Control - Root | 11.698 |