Gene detail information of Glyur000300s00017262 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80840.1 | 2.00E-39 | WRKY DNA-binding protein 40 |
| NR | AFK45281.1 | 2.21E-118 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9SAH7|WRK40_ARATH | 2.00E-62 | Probable WRKY transcription factor 40 |
| trEMBL | tr|I3SYD9|I3SYD9_LOTJA | 8.00E-119 | Uncharacterized protein {ECO:0000313|EMBL:AFK45281.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00300 | 130672 | 132824 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.148 |
| SRR1783600 | control | 2.977 |
| SRR1783602 | moderate drought stress | 1.976 |
| SRR1811619 | moderate drought stress | 2.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 53.348 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 53.131 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.270 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.512 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.152 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.184 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 49.038 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.102 |
| SRR2868004 | Drought Stress (root) | 56.479 |
| SRR2967015 | Control (root) | 49.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 216.992 |
| SRR9715740 | Leaf | 143.531 |
| SRR9715741 | Leaf | 390.102 |
| SRR9715739 | Root | 7.119 |
| SRR9715742 | Root | 100.869 |
| SRR9715743 | Root | 89.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 134.431 |
| SRR8749028 | MeJA induced 9h | 49.780 |
| SRR8749029 | MeJA induced 9h | 29.964 |
| SRR8749030 | Uninduced | 16.273 |
| SRR8749031 | Uninduced | 9.856 |
| SRR8749032 | Uninduced | 21.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.043 |
| SRR8400027 | Control - Root | 65.453 |