Gene detail information of Glyur000300s00017258 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G16880.1 | 3.00E-105 | uridylyltransferase-related |
| NR | AFK46017.1 | 0 | unknown [Lotus japonicus] |
| COG | YP_008974772.1 | 7.00E-08 | UTP--GlnB (protein PII) uridylyltransferase, GlnD [Phaeobacter gallaeciensis DSM 26640] |
| Swissprot | tr|Q9FZ47|ACR11_ARATH | 4.00E-131 | ACT domain-containing protein ACR11 {ECO:0000305} (Precursor) |
| trEMBL | tr|I3T0H5|I3T0H5_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK46017.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00300 | 117019 | 122214 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.463 |
| SRR1783600 | control | 0.463 |
| SRR1783602 | moderate drought stress | 1.443 |
| SRR1811619 | moderate drought stress | 1.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.285 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.232 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.315 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.304 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.177 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.238 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 197.840 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 197.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.097 |
| SRR2868004 | Drought Stress (root) | 0.469 |
| SRR2967015 | Control (root) | 0.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 109.169 |
| SRR9715740 | Leaf | 204.175 |
| SRR9715741 | Leaf | 113.764 |
| SRR9715739 | Root | 0.881 |
| SRR9715742 | Root | 0.991 |
| SRR9715743 | Root | 1.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.044 |
| SRR8749029 | MeJA induced 9h | 0.096 |
| SRR8749030 | Uninduced | 0.008 |
| SRR8749031 | Uninduced | 0.006 |
| SRR8749032 | Uninduced | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.272 |
| SRR8400027 | Control - Root | 2.037 |