Gene detail

Gene detail information of Glyur000300s00017254

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G03220.1	1.00E-133	fucosyltransferase 1
NR	XP_004486606.1	0	PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9M5Q1\|FUT1_PEA	4.00E-174	Galactoside 2-alpha-L-fucosyltransferase
trEMBL	tr\|A0A072TWL5\|A0A072TWL5_MEDTR	0	Galactoside 2-alpha-L-fucosyltransferase-like protein {ECO:0000313\|EMBL:KEH21278.1}

Sequence

Transcript Sequence

>Glyur000300s00017254.1
TAAGCAGTCATTAATTGATAGATATATGCTCGTGGAGAATTAAGAAAAAAAATAGCTTTTGAAAAAAGTGAAGTGTAAAAGTTAATTTCAACTTATGTAAGAAACTATTAGTTAAAAAACACATATTAGAAATGCTTATGGAAAAATTTATCCAGACAGGTGAGTATGCACGGGATGTGCTGCTATTCCAATATTCAACGATCGACAATGTAGAAATCCTTGGAAATTTTTAAAGTCACGATGGATATAATGGGGTTGAGTTTCAAGAGATTGGGGATATTGCTGGTTGTGGGTTCCATAATATTCCCTATATTAGTCACATTTACTCTGATGCACCAAAACTCAATCTATGATCTTTTTGAGGGATTTTCCAAGATTAACGTATTGGCTGGAAGAGCCCAGAATGCTGCTACTTCTACTGTCTTGAAACAAGGAGCTCAAAATATTACAGTTGAAGCTGGGGGAGGAAAAGATCAGCATATTACAGAGTCAGTGGTAGATAAGGTNTTGGGAGACAAAGTTCAAAATGAGATGCCTGGGACCTTCCAGGAACGAGCTCAGACAATAACAATCTCAGATATTGGTCCAAAGAATCATTCACTTGAAGNCCAAAAGAATGATCCATCCCTATCTACTACTAGCATTGCTAATGACCAATTCCTTGATGGACTTCTAGTTTCCACATTTGATGAAGCATCTTGCTTAAGTAGGTATCAATCTCACTTATACCGCAAAGCTTCCCNTTATAAACCTTCTGCATATTTGATATCCAAGCTACGAAACTATGAACATCTTCATAGAAGTTGNGGACCTCATACCAAATCCTACAGTAAAATGATGAGAAAGGGCACAAAGTTTAGCAAAAATGATGCAGGTACAAAGTGCAAATACCTTATCTGGACAGCTTCCAATGGCTTAGGGAACAGGATGATAACCTTGGCTGCAGCATTTCTTTATGCTATCCTCACAGACCGTGTTCTACTTGTCAAACTGGGGACCGACATGTTTGGTCTCTTTTGTGAGCCATTTCCTGATTCGTCATGGTTATTGCCCAGGAATTTTCCTTATTGGAAAGATCAGAAGCATATTGAAACATATGAAAGCNTGCTAAGGAATAGCAAGAAAAACAGTTCAAAGGAGCTTTTGCCACAATTTCTTATTCTTAATCTACAACACACCCATGATGGTCATAACAACTTTTTCCANTGTGATCAGAGTCAGGGTCTTCTCCAGAAAGTCCCCGTTCTGATTTTGCGGTCGGATCAGTATTTCGTCCCTTCTCTTTTTATGATCCCATCATTTAGACAAGATCTAAGCAAAATGTTCCCCCAGAAAGACACAGTTTTTCACCATTTGGGACGTTACCTTTTTCATCCATCAAATGAGGCATGGAAACTAATTAGCAGATCCTATGAGGCACACTTAGCCAAGGCAAATGAGAGAATTGGCCTGCAGATTAGAGTATTTAACACTCACAAAGCACCACATCAAACCATCATCAATGAGATTATAGCCTGCACTCTTCGGCATAAGTTGCTGCCTGAATCGAATGCGCACAAGTCAGCATCTTCTGCGAAGAAGTGGACATCAAAAGCCGTGCTTGTGGCATCTTTATACTTGGAATATGGCGAGAAGCTGAGGACTATGTATACGGCAAATGCAAGTGCGACCGGGGAAGTGATAAAAGTTTATCAGCCAAGTCACGAAGAGCGTCAAAAATCAAACAACGACACGCACAACATTAAGGCATGGACTGAGATATATCTGCTGAGTTTGTGTGATGTGTTGATTACAAGCCCCAAGTCTACATTTGGGTATGTTGCACATGGTCTTGGAGGGTTGAAGCCATGGATTCTGCGCAGGGCATATGGGGAAACCATCCCNGATCCGCCGTGTCAACGAGCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGACTGTAGGGCCAATAGCACAATTGATTTTACTTCCCATTTTCATCACATCAAGCATTGTGAAGATGTAACTAGTGGATTGAGGCTGGTTAATGCTAATCGCTAGCTAGGTAATAATAAACTAACTATTCACACCACACCAGCAAGCAAGCACTGAATTATTTGGGACCTAACTAATATAATTATTCACTAGTCCTTGTTCGCTCCAACATTTCACTACTTAACTTTGTCCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00300	82252	85596	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT37

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0042546 cell wall biogenesis

cellular_component
GO:0016020 membrane

molecular_function
GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000300s00017254.1	PF03254.8	XG_FTase	117	572	1.40E-197

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.270
SRR1783600	control	9.075
SRR1783602	moderate drought stress	7.880
SRR1811619	moderate drought stress	7.935

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.637
DRR006520	Root Summer glycyrrhizin high producing strain	11.574
DRR006521	Root Winter glycyrrhizin high producing strain	4.963
DRR006522	Root Winter glycyrrhizin high producing strain	4.640
DRR006523	Root Summer glycyrrhizin low producing strain	25.112
DRR006524	Root Summer glycyrrhizin low producing strain	25.635
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.960
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.577

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.222
SRR2868004	Drought Stress (root)	19.836
SRR2967015	Control (root)	18.072

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.548
SRR9715740	Leaf	5.063
SRR9715741	Leaf	4.441
SRR9715739	Root	1.013
SRR9715742	Root	3.982
SRR9715743	Root	3.334

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	46.415
SRR8749028	MeJA induced 9h	24.610
SRR8749029	MeJA induced 9h	20.767
SRR8749030	Uninduced	14.758
SRR8749031	Uninduced	9.701
SRR8749032	Uninduced	9.819

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.852
SRR8400027	Control - Root	8.279