Gene detail information of Glyur000300s00017253 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25225.1 | 2.00E-14 | |
| NR | XP_007150815.1 | 1.04E-30 | hypothetical protein PHAVU_005G182800g [Phaseolus vulgaris] |
| trEMBL | tr|V7BY12|V7BY12_PHAVU | 4.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:ESW22809.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00300 | 68949 | 80495 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000300s00017253.1 | PF15054.1 | DUF4535 | 22 | 67 | 7.70E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.654 |
| SRR1783600 | control | 6.492 |
| SRR1783602 | moderate drought stress | 9.443 |
| SRR1811619 | moderate drought stress | 9.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.286 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.085 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.511 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.988 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.906 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.858 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.498 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.761 |
| SRR2868004 | Drought Stress (root) | 7.666 |
| SRR2967015 | Control (root) | 8.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.528 |
| SRR9715740 | Leaf | 7.623 |
| SRR9715741 | Leaf | 6.195 |
| SRR9715739 | Root | 3.430 |
| SRR9715742 | Root | 5.998 |
| SRR9715743 | Root | 3.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.263 |
| SRR8749028 | MeJA induced 9h | 13.733 |
| SRR8749029 | MeJA induced 9h | 18.900 |
| SRR8749030 | Uninduced | 8.791 |
| SRR8749031 | Uninduced | 9.103 |
| SRR8749032 | Uninduced | 14.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.562 |
| SRR8400027 | Control - Root | 11.168 |