Gene detail information of Glyur000300s00017247 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80920.1 | 9.00E-31 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_004507050.1 | 6.31E-64 | PREDICTED: chaperone protein dnaJ 8, chloroplastic-like [Cicer arietinum] |
| COG | YP_004060726.1 | 2.00E-11 | heat shock protein dnaj domain-containing protein [Sulfuricurvum kujiense DSM 16994] |
| Swissprot | tr|Q9SAG8|DNAJ8_ARATH | 5.00E-45 | Chaperone protein dnaJ 8, chloroplastic (Precursor) |
| trEMBL | tr|I3T8G8|I3T8G8_LOTJA | 3.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:AFK48810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00300 | 40594 | 42089 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000300s00017247.1 | PF00226.26 | DnaJ | 38 | 90 | 1.70E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.314 |
| SRR1783600 | control | 0.263 |
| SRR1783602 | moderate drought stress | 0.274 |
| SRR1811619 | moderate drought stress | 0.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.295 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.054 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.731 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.672 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.532 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.491 |
| SRR2868004 | Drought Stress (root) | 97.574 |
| SRR2967015 | Control (root) | 122.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.346 |
| SRR9715740 | Leaf | 4.634 |
| SRR9715741 | Leaf | 23.815 |
| SRR9715739 | Root | 2.464 |
| SRR9715742 | Root | 3.003 |
| SRR9715743 | Root | 2.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 408.969 |
| SRR8749028 | MeJA induced 9h | 385.772 |
| SRR8749029 | MeJA induced 9h | 225.256 |
| SRR8749030 | Uninduced | 191.150 |
| SRR8749031 | Uninduced | 882.699 |
| SRR8749032 | Uninduced | 620.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.153 |
| SRR8400027 | Control - Root | 5.363 |