Gene detail information of Glyur000299s00021246.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11300.1 | 2.00E-20 | protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding |
| NR | KEH37465.1 | 1.32E-71 | receptor-like kinase [Medicago truncatula] |
| Swissprot | tr|Q9SXB4|Y1130_ARATH | 4.00E-22 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 (Precursor) |
| trEMBL | tr|A0A072VH51|A0A072VH51_MEDTR | 5.00E-72 | Receptor-like kinase {ECO:0000313|EMBL:KEH37465.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00299 | 182609 | 186504 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.7.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000299s00021246.1 | PF07714.12 | Pkinase_Tyr | 109 | 200 | 2.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.011 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.578 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.584 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.048 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.173 |