Gene detail information of Glyur000299s00021244 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56850.1 | 1.00E-22 | |
| NR | XP_006587006.1 | 3.52E-146 | PREDICTED: transcriptional regulator ATRX homolog isoform X2 [Glycine max] |
| trEMBL | tr|K7LC43|K7LC43_SOYBN | 1.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G07081.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00299 | 157641 | 163205 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.894 |
| SRR1783600 | control | 0.815 |
| SRR1783602 | moderate drought stress | 0.618 |
| SRR1811619 | moderate drought stress | 0.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.153 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.217 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.073 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.523 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.279 |
| SRR2868004 | Drought Stress (root) | 0.354 |
| SRR2967015 | Control (root) | 0.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.895 |
| SRR9715740 | Leaf | 4.426 |
| SRR9715741 | Leaf | 5.620 |
| SRR9715739 | Root | 0.057 |
| SRR9715742 | Root | 0.110 |
| SRR9715743 | Root | 0.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.002 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.875 |
| SRR8400027 | Control - Root | 2.477 |