Gene detail

Gene detail information of Glyur000298s00025035

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G06970.1	Protein of unknown function (DUF810)
NR	XP_003627933.1	hypothetical protein MTR_8g040190 [Medicago truncatula]
trEMBL	tr\|G7LHI4\|G7LHI4_MEDTR	Plant/MOJ9-14 protein {ECO:0000313\|EMBL:AET02409.1}

Sequence

Transcript Sequence

>Glyur000298s00025035.1
ATGATGAACTCAATTGATTGCTCCTTTTCACCTCTGCTTCCAGTTTCACTCACGATAGTCTTCACAGCTCGACTCAAAGAGAATGCCATAGAGCTTCTCCAGAGATATAGAAGGGACAGGCGAGTGCTTCTTGATTTTATACTTTCAGGGAGCTTAATCAAGAAAGTTGTGATGCCACCTGGTGCGGTTACGCTGGATGATGTGGATCTAGATCAAGTCAGTGTTGATTATGTGCTCAACTGTGCTAAAAAGAGTTTAATGCTTGAGCTTTCAGAAGCAATTAGAGATTATCATGACCATACTGGGTTACCCCAAATGAGTGATACAGGTTCAGTTGGTGAATTTTATTTGGTCACTGATCCTGGGTCTTCAGGTTCACCTCCCAAAAGGGCACCGCCACCTCTTCCTATTTCTGCAGTGCCTCCTATCGCTGTTTCCACTCCACCTCCTGTTTTCCCATCATCTCCAATTGTTTCTAATGTATCAAGATCAGAGTCTTTTGACTCCACACAAGAAAAGGAACTAACTGTGGATGATATTGAAGACTTTGAGGACGACGACGATGCTGCGGTGGTCGAAGGCCTCAGGGCTAAAAGGACTCTAAATGATGCTTCTGATCTTGCTGTAAAATTACCTTCTTTTACCACAGGCATCACAGATGATGATCTCCGTGAAACTGCATATGAGGTCCTCTTGGCTTGTGCTGGAGCCACAGGGGGTCTGATTGTCCCATCAAAAGAAAAAAAGAAAGATAAAAAATCCAGTTTGATTAGGAAGCTTGGGCGCAGCAAAAGTGGAAGTGTCGTATCCCAGTCTCAAAATGCTCCTGGATTGGTTAGCTTGTTGGAAACCATGCGTGTTCAATTGGAGATATCTGAGTCAATGGATATTAGAACAAGACAAGGGTTGCTAAATGCTCTTGTGGGCAAGGCGGGGAAAAGGATGGATACTCTTTTGGTTCCCTTGGAGTTGCTTTGCTGTATTGCACGCACAGAATTTTCTGATAAGAAGGCTTTTATACGGTGGCAAAAGAGGCAGTTAAAAGTTTTGGAGGAGGGGCTTGTTAATCACCCTGCTGTTGGATTTGGTGAATCTGGGCGCAAGACGAATGAGTTGAGGATTCTTTTGGCAAAGATTGAGGAATCTGAGTTTCTCCCATCTTCGGCTGGTGAACTTCAAAGGACAGAATGTTTGAGGTCTCTAAGGGAGATTGCCAATCCACTTGCAGAGAGACCGGCTCGGGGTGACTTAACTGGTGAAATATGCCATTGGGCAGATGGTTACCACTTCAATGTCAGACTATATGAAAAGTTACTATTAAGTGTATTTGACATGCTAGACGAGGGAAAGCTGACAGAGGAAGTGGAAGAAATTCTTGAACTTTTGAAGTCTACTTGGCGAGTGTTAGGAATCACAGAGACAATCCATCACACTTGCTATGCATGGGTTTTATTTCGTCAGCAAGGGATTTTGCTGCATGCAATTGAGCAATTAAAAAAAATACCACTGATGGAACAACGAGGCCAGCAAGAGAGGATGCACTTAAAAAGCTTGCGTTCCAAGGTTGAAGGTGAACGAGACATGTCTTTCTTACAGGCTTTCTTAACACCAATTCAGAGATGGGCTGACAAGCAGCTTGGAGATTACCATCTGCATTTCAGTGAGGGTTCAGCAACTATGGAAAAGATCGTAGCAGTTGCAATGATTACCAGGAGACTTCTACTGGAAGAACCAGAAACTACCATGCAATCCTTGCCAGTTAGTGATCGAGATCAGATAGATATATATATCACATCATCAATTAAGAGTGCATTTTCAAGGACAGTTCAAGTTGTTGACAGAGTAGATATGTCACATGAGCATCCCTTGGCATTGCTTGCAGAAGAACTCAAGAAGCTCCTAAAAAAAGATTCAGTAACTTTCATGCCTGTTTTATCTCAGAGACATCCTCAAGCAACTGTNGTATCTGCATCATTGGTTCACAAACTTTATGGCCACAAACTGAAACCCTTTCTGGAGGCTGCAGAACATTTAAGTGAGGATGTCATATCAGTGTTCCCAGCAGCTGAAAGCCTAGAACAGTTCATAATGGCACTTATTACATCTGCATGCCTTGAAGAAAATGCTGAGATCTTGTTGAAGAAATTGAATCTCTACCAGATTGAGACAAAATCTGGAACATTGGTGTTACGCTGGGTCAATTCGCAGCTTGGAAGAATTTTAGGCTGGGTAGAGCGGGTTGTTCAACAGGAGCATTGGGACCCAATATCTCCTCAACAGCGGCATGCTGGTTCTATTGTGGAAGTCTACAGAATTGTCGAGGAGACAGTTGATCAATTTTTCGGTCTCAAAGTTCCAATGAGGTTTACAGAACTGAATAGCTTGTTCCGTGGCATCGACAATGCTCTTCAAGTGTATTCAAATCTCGTTGTTAATGACTTGGCAAGCAAGGAGGATTTAATTCCACCTGTGCCTATTCTCACGCGATACAGAAAGGAAGCTGGAATAAAAGCTTTCGTGAAGAAGGAACTATTTGACACTCGTGTACCTGAGCCTGATGAGACAAGGCCTGCTGAAATTAGTGTCCTTGCAACTCCAACACTTTGTGTTCAGTTAAATACTTTATATTATGCGATCAGTCATCTGAATAAATTGGAAGATAACATTTGGGAGCGATGGACAAAAAAACGGTCACAGGAAAAACTCATAAGAAAATCCATAGACGAGAAGTCCAAAAAGGACACATTTGATGGAAGTAGAAAAGTTATAAATGCTGCTATGGACCGCATTTGTGAGTACACTGGAACTAAAATCATCTTCTGGGATTTGAGAGTGCCTTTTATGGACAACTTATATAAACCCAGTGTCTCAGGCTCTAGGGTGGATGTACTTATAGAACCACTTGATATGGAACTTAGCCAACTTTGCGATATTGTTGTGGAGCCTCTCAGGGATCGAATAGTGACAAGTCTTCTTCAAGCATCATTGGATGGCTTACTCCGTGTTATCCTAGACGGTGGTTCATCGAGAGTTTTCATTCCTGGTGATGCAAAATTGTTGGAGGAAGATCTGGAGGTCCTAAAGGAATTCTTTATATCTGGAGGTGATGGGCTTCCTCGGGGTGTTGTCGAAAATCAGGTTGCACGTGTTCGGCATGTGATCAAGTTGCATGGCTACGAGACTCGAGAGTTGATCGAAGACTTGAAATCTGCTAGTGGCCTGGAAATGCAAGGTAGCAAAAGCAAACTTGGAGCTGATTCCAAAACTTTATTGAGAATATTATGCCATAGGAATGACTCAGAAGCCTCTCAATTTCTGAAGAAACAATTCAAGATACCCAAGTCTTCTGCATAAGGGAATGTGGACAAGAGGAAAGCAGCAAAATTTTCNTTGTGGAGCTAGCTTTCTGTGAATACTCATTGCTGCCAATTTGCCATACATATATTTTTTTTGGTCAATATTTGGTATTTTTGAAATAGGTCATTTGGTGTATAATTAGGTGCCAGAACTGTTTTTTTTTCTTGGTCTAACTACACTGTCGNTGATCTTAATTTGTAAAATTTCCTCCATGTGAATACTGTAAGAATTC

Protein Sequence

>Glyur000298s00025035.1
MMNSIDCSFSPLLPVSLTIVFTARLKENAIELLQRYRRDRRVLLDFILSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKSLMLELSEAIRDYHDHTGLPQMSDTGSVGEFYLVTDPGSSGSPPKRAPPPLPISAVPPIAVSTPPPVFPSSPIVSNVSRSESFDSTQEKELTVDDIEDFEDDDDAAVVEGLRAKRTLNDASDLAVKLPSFTTGITDDDLRETAYEVLLACAGATGGLIVPSKEKKKDKKSSLIRKLGRSKSGSVVSQSQNAPGLVSLLETMRVQLEISESMDIRTRQGLLNALVGKAGKRMDTLLVPLELLCCIARTEFSDKKAFIRWQKRQLKVLEEGLVNHPAVGFGESGRKTNELRILLAKIEESEFLPSSAGELQRTECLRSLREIANPLAERPARGDLTGEICHWADGYHFNVRLYEKLLLSVFDMLDEGKLTEEVEEILELLKSTWRVLGITETIHHTCYAWVLFRQQGILLHAIEQLKKIPLMEQRGQQERMHLKSLRSKVEGERDMSFLQAFLTPIQRWADKQLGDYHLHFSEGSATMEKIVAVAMITRRLLLEEPETTMQSLPVSDRDQIDIYITSSIKSAFSRTVQVVDRVDMSHEHPLALLAEELKKLLKKDSVTFMPVLSQRHPQATVVSASLVHKLYGHKLKPFLEAAEHLSEDVISVFPAAESLEQFIMALITSACLEENAEILLKKLNLYQIETKSGTLVLRWVNSQLGRILGWVERVVQQEHWDPISPQQRHAGSIVEVYRIVEETVDQFFGLKVPMRFTELNSLFRGIDNALQVYSNLVVNDLASKEDLIPPVPILTRYRKEAGIKAFVKKELFDTRVPEPDETRPAEISVLATPTLCVQLNTLYYAISHLNKLEDNIWERWTKKRSQEKLIRKSIDEKSKKDTFDGSRKVINAAMDRICEYTGTKIIFWDLRVPFMDNLYKPSVSGSRVDVLIEPLDMELSQLCDIVVEPLRDRIVTSLLQASLDGLLRVILDGGSSRVFIPGDAKLLEEDLEVLKEFFISGGDGLPRGVVENQVARVRHVIKLHGYETRELIEDLKSASGLEMQGSKSKLGADSKTLLRILCHRNDSEASQFLKKQFKIPKSSA

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00298	121524	139278	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000298s00025035.1	PF05664.6	DUF810	217	887	8.30E-241

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.385
SRR1783600	control	13.421
SRR1783602	moderate drought stress	11.946
SRR1811619	moderate drought stress	11.892

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	23.723
DRR006520	Root Summer glycyrrhizin high producing strain	23.566
DRR006521	Root Winter glycyrrhizin high producing strain	7.301
DRR006522	Root Winter glycyrrhizin high producing strain	7.071
DRR006523	Root Summer glycyrrhizin low producing strain	19.147
DRR006524	Root Summer glycyrrhizin low producing strain	19.115
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.172
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.025

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	41.526
SRR2868004	Drought Stress (root)	41.151
SRR2967015	Control (root)	43.925

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.250
SRR9715740	Leaf	19.808
SRR9715741	Leaf	23.831
SRR9715739	Root	3.428
SRR9715742	Root	23.210
SRR9715743	Root	18.161

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.941
SRR8749028	MeJA induced 9h	30.970
SRR8749029	MeJA induced 9h	16.878
SRR8749030	Uninduced	9.024
SRR8749031	Uninduced	6.636
SRR8749032	Uninduced	6.521

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.438
SRR8400027	Control - Root	41.598