Gene detail

Gene detail information of Glyur000297s00023394

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G34300.1	1.00E-105	lectin protein kinase family protein
NR	XP_004498719.1	0	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum]
COG	YP_003797667.1	1.00E-23	putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
Swissprot	tr\|Q9XID3\|Y1343_ARATH	1.00E-120	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (Precursor)
trEMBL	tr\|I1KKX7\|I1KKX7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G27370.1}

Sequence

Transcript Sequence

>Glyur000297s00023394.1
ATGGCTCTCAGCATCCCCACTTTCTCCTTCTTCTTCTTCTTCTTCTTCTTGTTTCTCCTCTGCAACCTTCAACCCTCAATTGCCCAACAACAACTCAAATCCTTCAACATTTCACTCTCCCCATGGCTCCCCTCACAGAACAGAACCCTTCTCTCCCCAGACTCCACCTTCACAGCTGGCTTCTTTCCCATACCCAATTCCCCAAACCTCTTCACCTTCTCTGTTTGGTTCACCAAAGTCCCTCACACTGCAAACCCTCTCGTATGGAGTTCTTCAACCCAAGTGAACCGCTCTGCCTCACTTGTCATCACCTCCAAAGGGGAGCTTCTTCTCCTTGGTTCACCCTTTCAAAATAATGCTTCTTCTTCCCCTGCTGGTTCTAATTCCAATTCCACACAACTCCTTCTAGATGAGAGTGGAAAATTAGTCTTTGGGAATTGGAGCAGCTTTGCTAATCCAACCAACACCATCTTGCCCAACCAAAACATCAGTGGGATTGAGCTTCATTCTAATAATGGGAAATTCAAGTTCATCAACTCTCAGTTCTTAGTTCTCAATGACAATTCCACCTCAGACTCTAGTAGTACTCAGTACTATAAGGCCCCAAATCCCTTGATAAGCATGGACAATGANGGGAAGATGAGCATGCAAGGTAACTCCTTTCTCACTTCTGATTATGGTGACCCCAGGTTTAGAAAACTGGTTCTTGATGAGGATGGGAATCTCAGAATCTACAGCTTCTACCCTGAGCAGCAAAACAAGTGGGTAGTGGTTTGGATGGGGATATGGGAGATGTGCAAAATCAAAGGCAAATGTGGGCCTAATGCTATCTGCATGCCCAGAGAGGATTTGTATAACTCTACTGACTGTGTTTGCCCATCTGGGTTCAAGCCAGTTCAAGGTGTGCCTGAAAAAGGTTGCACAAGGAAAATCCCACTCTCACGAAACACCAAGTTTATCAGGATGGACTATGTAAACTACACCAGCGACGGCCTTTTGAATCAAATCAATGCTGGGAACTACACAGTCTGTGAAGCCAGCTGCAGAACAGACCAAAAGTGTCTTGGGTTTGGGTTCAAATATGATGGGTCTGGCTATTGTGTTTTGCTACTGGGGAAACAGCTTCAATATGGTTACTGGTCACCAGGGACTGAAACTGCCTTGTTTCTGAAAGTTAACGAATCTGAATCAGAAGGCACCAACTTCATTGGCATGACCCAAGTGATGCAAACAACATGCCCTGTCAAGATAAGCCTGCCACTACCACCCAAGGACTCAAACACCACCACCAGAAACATTGTCATAATATGCACCCTTTTTGCTGCAGAACTCATTGCTGGGGTGGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGGGACATGGCCACCACACTAGGCCTTGAGCTCTTACCTGCCGGTGGCCCCAAAAGGTTCACCTACTCAGAAATCAAAGCTGCCACCAATGACTTCTCTAACCTCATAGGGAGAGGTGGCTTTGGAGATGTCTACAAAGGGGAGTTGCCCGACCACCGCATCGTCGCCGTGAAGTGCTTGAAAAATGTCACCGGNGGTGATGCTGAGTTCTGGGCAGAGGTCACCATCATTGCCAGGATGCACCACCTCAACTTGGTTCGATTATGGGGTTTCTGTGCAGAGAAAGGTCAAAGAATACTTGTCTATGAGCACATCCCGGGTGGATCGTTGGACAAGTACCTCTACCGGGTCAAGTCTCTCAAGGGTAGTGGTGATTCTGTTCCAAGTCATAGCCCCAACAACACACAAGAGAAACCTGTTTTGGATTGGAATATGAGGTACAGAATTGCTCTGGGTGTGGCCAGGGCTATTGCATACTTGCATGAGGAGTGTTTGGAATGGGTTTTGCATTGTGATATCAAGCCTGAGAACATTCTCTTGGGCGATGACTTTTGCCCCAAGATATCAGATTTTGGGTTGGCCAAGCTGAGGAAAAAGGAGGATATGGTGACTATGTCTAGAAGGAGGGGTACTCCTGGTTATATGGCTCCTGAGTGGATCACAGCAGACCCAATCACTTCCAAGGCTGATGTGTATAGCTTTGGTATGGTGCTGTTGGAGCTTGTGAGTGGGGTGAGGAACATGGAGATCCAAAGTTCTGTGCTCCGGAGTGATGAGTGGTATTTCCCCGGGTGGGCTTTTGATAAGATGTTTAAGGAAATGAGAGTGGAAGACATTCTGGATAGTGAGATTAGGGACGCTTATGATAGTAGGGCCCATTTTGAATTGGTTAATAGAATGGTGAAGACAGCAATGTGGTGCCTGCAGGATAGGCCTGAGTCGAGGCCATCCATGGGCAAGGTGGCTAAGATGTTGGAAGGGACTGTGGATATCTCGGAGCCCAAGAAGCCCACTGTTTTCTTCCTAGGGGAAGAGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00297	114132	116552	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0048544 recognition of pollen

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000297s00023394.1	PF01453.19	B_lectin	84	165	8.30E-08
Glyur000297s00023394.1	PF00954.15	S_locus_glycop	228	299	1.30E-07
Glyur000297s00023394.1	PF00069.20	Pkinase	495	783	1.00E-45

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.905
SRR1783600	control	5.095
SRR1783602	moderate drought stress	4.281
SRR1811619	moderate drought stress	4.166

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.657
DRR006520	Root Summer glycyrrhizin high producing strain	3.693
DRR006521	Root Winter glycyrrhizin high producing strain	5.876
DRR006522	Root Winter glycyrrhizin high producing strain	5.921
DRR006523	Root Summer glycyrrhizin low producing strain	8.049
DRR006524	Root Summer glycyrrhizin low producing strain	7.850
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.457
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.477

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.520
SRR2868004	Drought Stress (root)	69.813
SRR2967015	Control (root)	50.628

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.758
SRR9715740	Leaf	8.837
SRR9715741	Leaf	18.315
SRR9715739	Root	6.563
SRR9715742	Root	12.508
SRR9715743	Root	10.051

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.863
SRR8749028	MeJA induced 9h	28.252
SRR8749029	MeJA induced 9h	18.653
SRR8749030	Uninduced	72.881
SRR8749031	Uninduced	59.427
SRR8749032	Uninduced	39.857

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.541
SRR8400027	Control - Root	22.100