Gene detail information of Glyur000296s00018770 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60030.1 | 2.00E-12 | |
| NR | XP_007161009.1 | 1.71E-76 | hypothetical protein PHAVU_001G035300g [Phaseolus vulgaris] |
| trEMBL | tr|V7CUE3|V7CUE3_PHAVU | 6.00E-77 | Uncharacterized protein {ECO:0000313|EMBL:ESW33003.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00296 | 183780 | 185996 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.755 |
| SRR1783600 | control | 16.910 |
| SRR1783602 | moderate drought stress | 19.902 |
| SRR1811619 | moderate drought stress | 19.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.644 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.490 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.940 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.665 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.009 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.405 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.756 |
| SRR2868004 | Drought Stress (root) | 21.622 |
| SRR2967015 | Control (root) | 22.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.744 |
| SRR9715740 | Leaf | 15.173 |
| SRR9715741 | Leaf | 12.712 |
| SRR9715739 | Root | 1.385 |
| SRR9715742 | Root | 11.115 |
| SRR9715743 | Root | 7.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 81.874 |
| SRR8749028 | MeJA induced 9h | 44.169 |
| SRR8749029 | MeJA induced 9h | 63.474 |
| SRR8749030 | Uninduced | 25.782 |
| SRR8749031 | Uninduced | 27.639 |
| SRR8749032 | Uninduced | 23.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.022 |
| SRR8400027 | Control - Root | 22.878 |