Gene detail information of Glyur000296s00018759 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26110.1 | 2.00E-24 | Protein of unknown function (DUF761) |
| NR | XP_004498886.1 | 1.72E-139 | PREDICTED: uncharacterized protein LOC101503735 [Cicer arietinum] |
| trEMBL | tr|G7I9X7|G7I9X7_MEDTR | 1.00E-117 | Plant/MHM17-10 protein, putative {ECO:0000313|EMBL:AES59238.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00296 | 125536 | 126510 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000296s00018759.1 | PF14364.1 | DUF4408 | 10 | 43 | 2.20E-05 |
| Glyur000296s00018759.1 | PF05553.6 | DUF761 | 286 | 322 | 2.30E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.737 |
| SRR1783600 | control | 28.199 |
| SRR1783602 | moderate drought stress | 29.978 |
| SRR1811619 | moderate drought stress | 30.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.158 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.227 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 80.832 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 78.720 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.983 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.219 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 118.734 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 113.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.944 |
| SRR2868004 | Drought Stress (root) | 21.696 |
| SRR2967015 | Control (root) | 27.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.665 |
| SRR9715740 | Leaf | 25.099 |
| SRR9715741 | Leaf | 16.798 |
| SRR9715739 | Root | 10.104 |
| SRR9715742 | Root | 13.709 |
| SRR9715743 | Root | 9.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.998 |
| SRR8749028 | MeJA induced 9h | 19.252 |
| SRR8749029 | MeJA induced 9h | 37.723 |
| SRR8749030 | Uninduced | 0.914 |
| SRR8749031 | Uninduced | 0.349 |
| SRR8749032 | Uninduced | 1.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.886 |
| SRR8400027 | Control - Root | 50.596 |