Gene detail information of Glyur000296s00018747.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26170.1 | 2.00E-140 | cytochrome P450, family 711, subfamily A, polypeptide 1 |
| NR | XP_003549345.1 | 0 | PREDICTED: cytochrome P450 711A1-like [Glycine max] |
| COG | YP_003178415.1 | 3.00E-21 | cytochrome P450 [Halomicrobium mukohataei DSM 12286] |
| Swissprot | tr|B9DFU2|MAX1_ARATH | 3.00E-177 | Cytochrome P450 711A1 |
| trEMBL | tr|K7MNF3|K7MNF3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G34530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00296 | 32490 | 37967 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP711A1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000296s00018747.1 | PF00067.17 | p450 | 112 | 329 | 4.60E-18 |
| Glyur000296s00018747.1 | PF00067.17 | p450 | 328 | 424 | 3.20E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.641 |
| SRR1783600 | control | 18.113 |
| SRR1783602 | moderate drought stress | 8.006 |
| SRR1811619 | moderate drought stress | 8.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.743 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.189 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.546 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.457 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.099 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.218 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.354 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 87.146 |
| SRR2868004 | Drought Stress (root) | 80.235 |
| SRR2967015 | Control (root) | 54.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.654 |
| SRR9715740 | Leaf | 3.427 |
| SRR9715741 | Leaf | 12.227 |
| SRR9715739 | Root | 1.721 |
| SRR9715742 | Root | 3.385 |
| SRR9715743 | Root | 2.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.913 |
| SRR8749028 | MeJA induced 9h | 0.102 |
| SRR8749029 | MeJA induced 9h | 0.509 |
| SRR8749030 | Uninduced | 0.044 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.397 |
| SRR8400027 | Control - Root | 38.362 |