Gene detail information of Glyur000296s00018746 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26180.1 | 2.00E-60 | IQ-domain 6 |
| NR | XP_003549344.1 | 5.00E-151 | PREDICTED: protein IQ-DOMAIN 1-like [Glycine max] |
| Swissprot | tr|Q9SF32|IQD1_ARATH | 2.00E-20 | Protein IQ-DOMAIN 1 |
| trEMBL | tr|K7MNF2|K7MNF2_SOYBN | 2.00E-151 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G34520.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00296 | 29517 | 32241 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.807 |
| SRR1783600 | control | 8.723 |
| SRR1783602 | moderate drought stress | 5.478 |
| SRR1811619 | moderate drought stress | 5.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.392 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.483 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.742 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.775 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.586 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.042 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.238 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.311 |
| SRR2868004 | Drought Stress (root) | 2.072 |
| SRR2967015 | Control (root) | 2.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.943 |
| SRR9715740 | Leaf | 0.191 |
| SRR9715741 | Leaf | 0.926 |
| SRR9715739 | Root | 10.501 |
| SRR9715742 | Root | 14.259 |
| SRR9715743 | Root | 11.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.757 |
| SRR8749028 | MeJA induced 9h | 1.851 |
| SRR8749029 | MeJA induced 9h | 6.688 |
| SRR8749030 | Uninduced | 0.824 |
| SRR8749031 | Uninduced | 1.328 |
| SRR8749032 | Uninduced | 1.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.701 |
| SRR8400027 | Control - Root | 9.592 |