Gene detail information of Glyur000296s00018741 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11960.1 | 1.00E-122 | Protein of unknown function (DUF803) |
| NR | XP_004498870.1 | 0 | PREDICTED: NIPA-like protein 2-like [Cicer arietinum] |
| Swissprot | tr|Q8RWH8|NIPA9_ARATH | 7.00E-169 | Probable magnesium transporter NIPA9 |
| trEMBL | tr|I1M943|I1M943_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G11090.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00296 | 8148 | 12446 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.758 |
| SRR1783600 | control | 11.806 |
| SRR1783602 | moderate drought stress | 9.341 |
| SRR1811619 | moderate drought stress | 9.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.857 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.574 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.311 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.502 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.093 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.973 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.065 |
| SRR2868004 | Drought Stress (root) | 21.594 |
| SRR2967015 | Control (root) | 25.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.295 |
| SRR9715740 | Leaf | 5.286 |
| SRR9715741 | Leaf | 4.479 |
| SRR9715739 | Root | 7.328 |
| SRR9715742 | Root | 6.204 |
| SRR9715743 | Root | 5.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.030 |
| SRR8749028 | MeJA induced 9h | 11.293 |
| SRR8749029 | MeJA induced 9h | 11.235 |
| SRR8749030 | Uninduced | 7.515 |
| SRR8749031 | Uninduced | 8.288 |
| SRR8749032 | Uninduced | 9.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.873 |
| SRR8400027 | Control - Root | 19.917 |