Gene detail information of Glyur000295s00015302 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G14660.1 | 1.00E-43 | |
| NR | XP_004511323.1 | 2.70E-85 | PREDICTED: thymocyte nuclear protein 1-like [Cicer arietinum] |
| COG | YP_423538.1 | 4.00E-29 | hypothetical protein amb4175 [Magnetospirillum magneticum AMB-1] |
| trEMBL | tr|G7K0Z2|G7K0Z2_MEDTR | 9.00E-85 | EVE domain protein {ECO:0000313|EMBL:AES93600.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00295 | 147039 | 147476 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000295s00015302.1 | PF01878.13 | EVE | 8 | 128 | 2.20E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.095 |
| SRR1783600 | control | 18.057 |
| SRR1783602 | moderate drought stress | 15.137 |
| SRR1811619 | moderate drought stress | 14.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.886 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.263 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.204 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.503 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.293 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.946 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.224 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.613 |
| SRR2868004 | Drought Stress (root) | 12.594 |
| SRR2967015 | Control (root) | 10.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.544 |
| SRR9715740 | Leaf | 7.980 |
| SRR9715741 | Leaf | 8.102 |
| SRR9715739 | Root | 21.808 |
| SRR9715742 | Root | 11.266 |
| SRR9715743 | Root | 12.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.668 |
| SRR8749028 | MeJA induced 9h | 47.154 |
| SRR8749029 | MeJA induced 9h | 15.694 |
| SRR8749030 | Uninduced | 14.942 |
| SRR8749031 | Uninduced | 7.393 |
| SRR8749032 | Uninduced | 8.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.477 |
| SRR8400027 | Control - Root | 27.112 |