Gene detail information of Glyur000295s00015298 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19680.1 | 1.00E-94 | Protein of unknown function (DUF1005) |
| NR | XP_004511326.1 | 0 | PREDICTED: uncharacterized protein LOC101500065 [Cicer arietinum] |
| trEMBL | tr|G7K0Z7|G7K0Z7_MEDTR | 0 | DUF1005 family protein {ECO:0000313|EMBL:AES93605.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00295 | 93848 | 95101 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000295s00015298.1 | PF06219.7 | DUF1005 | 1 | 417 | 4.40E-157 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.897 |
| SRR1783600 | control | 32.982 |
| SRR1783602 | moderate drought stress | 119.917 |
| SRR1811619 | moderate drought stress | 120.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 196.831 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 194.451 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 102.638 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 101.894 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 544.692 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 541.910 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.467 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.347 |
| SRR2868004 | Drought Stress (root) | 52.236 |
| SRR2967015 | Control (root) | 48.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 109.404 |
| SRR9715740 | Leaf | 92.570 |
| SRR9715741 | Leaf | 90.207 |
| SRR9715739 | Root | 837.446 |
| SRR9715742 | Root | 714.332 |
| SRR9715743 | Root | 705.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 195.060 |
| SRR8749028 | MeJA induced 9h | 186.845 |
| SRR8749029 | MeJA induced 9h | 176.075 |
| SRR8749030 | Uninduced | 246.980 |
| SRR8749031 | Uninduced | 72.860 |
| SRR8749032 | Uninduced | 194.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.936 |
| SRR8400027 | Control - Root | 77.188 |