Gene detail

Gene detail information of Glyur000295s00015296

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G05200.1	1.00E-38	cysteine-rich RLK (RECEPTOR-like protein kinase) 25
NR	XP_004511327.1	1.90E-114	PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum]
Swissprot	tr\|Q9M0X5\|CRK25_ARATH	1.00E-48	Cysteine-rich receptor-like protein kinase 25 (Precursor)
trEMBL	tr\|G7K100\|G7K100_MEDTR	3.00E-113	Cysteine-rich receptor-kinase-like protein {ECO:0000313\|EMBL:AES93608.1}

Sequence

Transcript Sequence

>Glyur000295s00015296.1
TCTTAATTTCCTTTATGACTGCATAGGCGGCGATTATTGCTGCCTTTTCATAACACTAGACTTATTATTGATTATTTCCCCTCGATCTTCNAAGATGGCTACGGTAAAGTACTGGATTCTTGTACTTGTTTCCCTGTGTGGATTGCTGAACACGACAGCAGAAGCAGAAGAAGCCGCCCCCACTTACACGGCCACGCACTGCACAAACACAACCACTTACGCACCCAACAGTNCCTTCCAAACCAATCTCAACATACTTTTCTACTACCTCTCCAACAACATCTCCCACTCCAACGGTTACTTTTTCACCATCGTGGGTTTTGGCACCACCGATGCCGTGAGTGGACTCTTTCTCTGCCGCGGTGACGTCAGCAGCACCGCCTTGTGCAATCAGTGTGTCGCCGCCGCATTAGAAGAGATAAGACGGCACTGCCCCAACCAAACAGAGGCTCTGATCTGGTACGACCAGTGCTCCCTGCGCTACACAAACAAGTACTTCCCCGCCGACAGCATCGCCCCCAGGGTGAACCTGCACGATGCCCACAACGTCTCCGGCGTTGACTTGGGACGTTTCAACCAATCGCTGCATGGCTTGCTGAATGATTTGGCANCCAAAGCCGCCAGTTCCCAGCCGATGAAGTTCGCCGCCGGCGAGGCCGCGGTGACGAACTCGGTGACGGTGTATGCGTTGGAGCAGTGCACCAACGAGTTAACGAATAGTGAGTGTGAGAAGTGTTTGCAAAATGCCATCGGAACTCTTCCCTCGTGTTGCGACGGAAAACAGGGCGCAAGAGCTCTGCTTCCGTCCTGTAATGTCAGATACCAACTCTACCCTTTCTTCACTTTGTCTTCATCACCATCTTCAGGGGAAAGGACACTTGGACGGGGCACAATTGCCGTCATTGTTGTGGTGCCCGTTGCTTGGAAAAATTGGAGGAATGAAAAACCGCTAGAAATATTGGATGCTGATCTGGAAGAATCCTTTTCTCCCAGTGAAGTCATTAGATGCATTCAAATTGGTTTATTATGTGTCCAGCAAAATCCAGATGATAGACCGACAATGGAGAGAGTTGTTTCATATCTCAGTAGCGTTTCAGTGGAGTTACCATTGCCTCAAGAGCCTGCATTGATTCTCCTGGGTACTGGAACGAATCCAAATTACATGGTACCAACGGGAACGATTTTGGATCAACCTAATTACAATAGTAATTCTGCTGGATCCTCATCAATCAATGACTTGACCATGAGTAATTATTTTCCTCGATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00295	81096	84845	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000295s00015296.1	PF01657.12	Stress-antifung	34	133	3.20E-23
Glyur000295s00015296.1	PF01657.12	Stress-antifung	158	248	6.80E-22

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.424
SRR1783600	control	0.459
SRR1783602	moderate drought stress	0.179
SRR1811619	moderate drought stress	0.208

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.085
DRR006520	Root Summer glycyrrhizin high producing strain	0.100
DRR006521	Root Winter glycyrrhizin high producing strain	2.171
DRR006522	Root Winter glycyrrhizin high producing strain	2.180
DRR006523	Root Summer glycyrrhizin low producing strain	0.510
DRR006524	Root Summer glycyrrhizin low producing strain	0.492
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.118
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.124

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.574
SRR2868004	Drought Stress (root)	5.507
SRR2967015	Control (root)	5.940

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.816
SRR9715740	Leaf	0.431
SRR9715741	Leaf	1.973
SRR9715739	Root	0.196
SRR9715742	Root	0.340
SRR9715743	Root	0.274

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.259
SRR8749028	MeJA induced 9h	8.850
SRR8749029	MeJA induced 9h	3.886
SRR8749030	Uninduced	15.337
SRR8749031	Uninduced	18.605
SRR8749032	Uninduced	10.410

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.414
SRR8400027	Control - Root	1.369