Gene detail information of Glyur000295s00015291 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21215.1 | 3.00E-04 | |
| NR | XP_006573893.1 | 7.66E-65 | PREDICTED: uncharacterized protein LOC100816371 isoform X3 [Glycine max] |
| trEMBL | tr|I1LE97|I1LE97_SOYBN | 3.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G39840.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00295 | 48411 | 52626 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.801 |
| SRR1783600 | control | 1.979 |
| SRR1783602 | moderate drought stress | 4.960 |
| SRR1811619 | moderate drought stress | 5.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.364 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.852 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.563 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.235 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.379 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.238 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.655 |
| SRR2868004 | Drought Stress (root) | 16.611 |
| SRR2967015 | Control (root) | 26.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.587 |
| SRR9715740 | Leaf | 2.354 |
| SRR9715741 | Leaf | 3.814 |
| SRR9715739 | Root | 0.141 |
| SRR9715742 | Root | 0.126 |
| SRR9715743 | Root | 0.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.573 |
| SRR8749028 | MeJA induced 9h | 15.380 |
| SRR8749029 | MeJA induced 9h | 12.990 |
| SRR8749030 | Uninduced | 24.333 |
| SRR8749031 | Uninduced | 21.326 |
| SRR8749032 | Uninduced | 36.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.852 |
| SRR8400027 | Control - Root | 3.783 |