Gene detail information of Glyur000295s00015287 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28556.1 | 7.00E-19 | PAK-box/P21-Rho-binding family protein |
| NR | XP_003536549.1 | 5.01E-52 | PREDICTED: CRIB domain-containing protein RIC10-like [Glycine max] |
| Swissprot | tr|Q1G3K8|RIC7_ARATH | 2.00E-22 | CRIB domain-containing protein RIC7 |
| trEMBL | tr|I1LE83|I1LE83_SOYBN | 2.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G39730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00295 | 21962 | 22849 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000295s00015287.1 | PF00786.23 | PBD | 35 | 75 | 1.90E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.140 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.082 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.114 |
| SRR2967015 | Control (root) | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.766 |
| SRR9715740 | Leaf | 0.508 |
| SRR9715741 | Leaf | 0.528 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.224 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.946 |
| SRR8749028 | MeJA induced 9h | 33.981 |
| SRR8749029 | MeJA induced 9h | 53.049 |
| SRR8749030 | Uninduced | 32.407 |
| SRR8749031 | Uninduced | 159.891 |
| SRR8749032 | Uninduced | 127.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.350 |
| SRR8400027 | Control - Root | 0.300 |