Gene detail information of Glyur000294s00011880 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22500.1 | 1.00E-112 | uncoupling protein 5 |
| NR | XP_003602936.1 | 1.34E-179 | Mitochondrial 2-oxoglutarate/malate carrier protein [Medicago truncatula] |
| Swissprot | tr|Q9SB52|PUMP4_ARATH | 9.00E-164 | Mitochondrial uncoupling protein 4 |
| trEMBL | tr|G7J562|G7J562_MEDTR | 5.00E-180 | Dicarboxylate carrier protein {ECO:0000313|EMBL:AES73187.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00294 | 167998 | 168963 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000294s00011880.1 | PF00153.22 | Mito_carr | 4 | 120 | 1.20E-16 |
| Glyur000294s00011880.1 | PF00153.22 | Mito_carr | 128 | 220 | 2.60E-19 |
| Glyur000294s00011880.1 | PF00153.22 | Mito_carr | 228 | 320 | 6.50E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.608 |
| SRR1783600 | control | 1.406 |
| SRR1783602 | moderate drought stress | 1.684 |
| SRR1811619 | moderate drought stress | 1.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.681 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.461 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.231 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.225 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.140 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.711 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 94.114 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 93.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.383 |
| SRR2868004 | Drought Stress (root) | 31.795 |
| SRR2967015 | Control (root) | 97.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 681.261 |
| SRR9715740 | Leaf | 686.961 |
| SRR9715741 | Leaf | 711.584 |
| SRR9715739 | Root | 369.973 |
| SRR9715742 | Root | 333.741 |
| SRR9715743 | Root | 354.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 84.601 |
| SRR8749028 | MeJA induced 9h | 20.416 |
| SRR8749029 | MeJA induced 9h | 12.581 |
| SRR8749030 | Uninduced | 41.369 |
| SRR8749031 | Uninduced | 2.808 |
| SRR8749032 | Uninduced | 1.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.341 |
| SRR8400027 | Control - Root | 43.267 |