Gene detail information of Glyur000294s00011878 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58120.1 | 1.00E-61 | |
| NR | XP_004501628.1 | 9.12E-171 | PREDICTED: uncharacterized protein LOC101506643 [Cicer arietinum] |
| trEMBL | tr|G7J561|G7J561_MEDTR | 4.00E-159 | Peptide upstream ORF protein {ECO:0000313|EMBL:AES73186.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00294 | 161623 | 163347 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.437 |
| SRR1783600 | control | 9.777 |
| SRR1783602 | moderate drought stress | 7.008 |
| SRR1811619 | moderate drought stress | 6.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.614 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.536 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.533 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.500 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.846 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.238 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.491 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.376 |
| SRR2868004 | Drought Stress (root) | 2.628 |
| SRR2967015 | Control (root) | 2.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.387 |
| SRR9715740 | Leaf | 0.263 |
| SRR9715741 | Leaf | 0.470 |
| SRR9715739 | Root | 6.218 |
| SRR9715742 | Root | 6.546 |
| SRR9715743 | Root | 4.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.547 |
| SRR8749028 | MeJA induced 9h | 0.634 |
| SRR8749029 | MeJA induced 9h | 1.262 |
| SRR8749030 | Uninduced | 0.394 |
| SRR8749031 | Uninduced | 0.341 |
| SRR8749032 | Uninduced | 0.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.082 |
| SRR8400027 | Control - Root | 12.049 |