Gene detail information of Glyur000294s00011868 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73300.1 | 1.00E-136 | serine carboxypeptidase-like 2 |
| NR | AES73172.2 | 0 | 1-O-acylglucose:anthocyanin acyltransferase [Medicago truncatula] |
| COG | YP_002430787.1 | 3.00E-24 | peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01] |
| Swissprot | tr|Q9C7Z9|SCP18_ARATH | 3.00E-168 | Serine carboxypeptidase-like 18 (Precursor) |
| trEMBL | tr|G7J547|G7J547_MEDTR | 0 | 1-O-acylglucose:anthocyanin acyltransferase {ECO:0000313|EMBL:AES73172.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00294 | 111187 | 115450 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000294s00011868.1 | PF00450.17 | Peptidase_S10 | 55 | 474 | 5.00E-118 |
| Glyur000294s00011868.2 | PF00450.17 | Peptidase_S10 | 55 | 296 | 1.30E-72 |
| Glyur000294s00011868.2 | PF00450.17 | Peptidase_S10 | 303 | 436 | 1.30E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.792 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.024 |
| SRR2868004 | Drought Stress (root) | 0.042 |
| SRR2967015 | Control (root) | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.083 |
| SRR9715740 | Leaf | 61.876 |
| SRR9715741 | Leaf | 44.165 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.036 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.035 |
| SRR8749029 | MeJA induced 9h | 0.060 |
| SRR8749030 | Uninduced | 0.036 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.038 |