Gene detail

Gene detail information of Glyur000294s00011863.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G09730.2	1.00E-136	Cysteine proteinases superfamily protein
NR	KHN08258.1	0	Putative ubiquitin-like-specific protease 2B [Glycine soja]
Swissprot	tr\|Q8L7S0\|ULP2B_ARATH	4.00E-171	Probable ubiquitin-like-specific protease 2B
trEMBL	tr\|K7KJ35\|K7KJ35_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G09965.1}

Sequence

Transcript Sequence

>Glyur000294s00011863.1
AACCCAAAGGGTCCATTGCCAGTACTGGCATCAATTTCGCGCTCTAATCTATTAAGCTNGGCCCCGAGTCCGAGAGTACGGAATTTCAAACAAAAACCCTTTGTTGTGGGGTTGGGGACGACGATGAACGAGTCTCCGCGCAGAGATCTACGGGTCTTCGATTTCAACGAAGAGGACGAGATTGTCCCCGAGAAGAAACACCTCACCCTCAAATTCAACAAAACCCCTCCTACCCTCGATTCTCTCCCTCACGATGCCCAGGTCAATGAGGTTGGTGTCAAGAATGTTGCTAGTATTCCTTGTGTTGACGATGATGTANTTGGTGGTATTTTTAATTTGGAAAAGGGTTGTTCGGACCCCTGTCTCAAGACAGTGGAAGATATATTTGATAGCAAAGAGAAGAATTCTGAGTTGGGAGCTGCCGAACAATCAAATTTCATTAGCCATGAAAATCACTGTCACTTTAAAATAGATATTCATTGCTATGATGGACCAGAGAAAAGGGATACAAGTGGTGCCATATCTACACCTGAGACAAGCCAGATTGGTCCTTTGGGGTCTCCATCCAGTGTAAATGAATCAGTTGATGTTAATTCAGATGCAGATGAGTCCATGAATGAGAGTGCTCCAACAAGTGCTGCTTCTGATATTGAAGAGAATGGTGTATTTCATCTTTCATTGAATGGTTGTGGATNGAATGGCACAGACAATTCTGACATGGATGACACAAATACAGAAGTTGTTCTTCGTCCNGATTATATCATTTACCAGGATAATTATTATATGGGGCCAAAGTTAACTTTTTCACATTGTTGCATCAAGATCAATGTTTTAACTGCATGCATGAAGCAAGGAGCCATTGATCTTGAATGGGCAGTTGATGATCTCATTGATATTAAGTGTCAGTTGTTTCAAAGTAGTGGAACGGTCAATATAAAGATTCGTGCAATATCTAGTAATACAGATCAGTCAGATCATGTGAGCGACACTTCAGGCATTGAGGAATTGGAGATTGCGGTTGCTGATTCCAATTGGTCTTTGAGACATAAACAGATCACATCTCTTAGTGTGAAATACTTGGCTATTTGGAATATTGTGCTTAATACNGACGTCAAAGGCAATGAAACTAAATCACGTGGATCAAGATGCTACTTCCCTAGTTTTGAGGAGCCTTTTGATGAGGTCATCTATCCAAAAGGGGATCCGGATGCTGTTTCCCTGAGCAAGAGAGACTTTGATCTACTGCAACCAGATACATTCATTAATGACACGATAATTGACTTTTACATCCAGTATCTGAAGAACCAGATACAAGAGGAGGAAAAACCTAGATTTCATTTTTTTAATAGTTTTTTCTTTCGAAAGCTGGCTGATATGGACAAAAATCCGTCTAGTGCTTCTGATGGAAAAGCAGCATTTCTACGTGTTCGTAAATGGACAAGAAAAGTAAATTTATTTGAAAAGGATTATATCTTCATTCCTGTGAACTTCAATCTTCATTGGAGTTTAATAGTCATATGCCATCCTGGTGAAGTAGTTAATTTTAACGATAAAGAGTTGGACAAGTCACTTAAGGTACCCTGTATATTGCATATGGATTCTATAAAAGGAAGTCATAGCGGTCTGAAAAACCTGGTGCAAAGTTACTTGTGGGAAGAATGGAAAGAGAGACATAAAGATACATTGGAAGAAGACATTTCAGCAAGATTTTCAAATATGCATTTTCTTCCACTTGCGTTGCCACAGCAAGAAAACTCGTATGATTGTGGCCTCTTTCTTCTGCACTACCTAGAGCTCTTCCTTGCTGAAGCTCCTTTTAATTTCAATCCTCTCAACGTGGACTGGTTTCTGCCTGCTGAAGCTTATCTCAAGCGAACACTGATCCAGAGGTTAATCTTTGAACTCGTGGAAAACCACGGGTCACACGAAATCTCGTCCTCTGACTGTAGTGATGACCACCAGTACATAGAAAATGAGAACAGAACTGGCGTTGACCATCCCGAAGTCAATAGGGAGTCAACAACTTCCCATGCTGGGCAGGGAATAGAGATCACTCTATTGTCCGGATCATCGTCTTTGGATCCTCAATCTTTTAACAACTCGGGTTTGGTTCTTAAGGATCTTTTTGAGCCAGGTGCTACAGCCGCAGGAACAATATTGGCACAGTGCCAATCTTTTGACCAGCGTTCATCTGATTATCATTTCAACGGTTCAATATTTTCGATGGAGGAAGACTCGGGTCTTGGTGAACAGTTTATGTATTTGGCCACAGATCCCGACTTCCAGCATGTGGCTGGAGTCACACCTCAAACATGTTCTTTGCCATACCTTCCTAAGGATTGTGGGAATGAGACGTGTCACAGACCAGAAATCTCTCTGCATGTAGCCGAGTCATCTCCAAGTAGTGCCTCAGATGATTCAAAAGACATCGGGGTTGCCGAAAATTGTGTCGGTGGGAATGAACCCATATCATTGAATGAGGCTGAACAAGGTGAAAAAATTTGTTCGCCCACAGAAAATACCGACCATTTTATAGATATTTCTGGTTCTGCTGGTAGCGATTTGCCAATTACCTCTATCATGGAAATTTCTCAAGACTCAATCACGAAGTGTGATGGTGACAAGAATGGAGATATACACTCTTCCTTTCAGGAAACCCCCACAGTAACATTGCATCAAGATTCTGATGCAGTAGATGACGAGGCCCCATGTGATGATGGCATGGCACCTAATATTTGTGAGGAACAAGCTGCAAAGAGGAGGCGGCTTATGCCTCTGCAATGCAGAAGTGAGGGAATTGTGACGGAATCCAATTTGTAGATATGGATGAATATGGCTTCTTTTACCCATTGCTTTTAATTGTTTCTATGTTTTACTTAGCGAATGTGTGAATATTGTCGTTGCTTGGTAGCGGTTATTTTAATGATGTTTATGTGGCCATGTTTTTTATTCTNTTGCGATCTAGGTTGAGAAAATATTTGCGACTTTAGATACGATCCAGCGTGTTTGTTTCAACGTCGACACATGTCTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00294	96031	103376	+

Gene family

Gene family	subfamily
Ubiquitin Family	ULP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0008234 cysteine-type peptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000294s00011863.1	PF02902.14	Peptidase_C48	379	567	5.00E-38

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.128
SRR1783600	control	14.134
SRR1783602	moderate drought stress	15.957
SRR1811619	moderate drought stress	15.984

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.642
DRR006520	Root Summer glycyrrhizin high producing strain	13.634
DRR006521	Root Winter glycyrrhizin high producing strain	14.421
DRR006522	Root Winter glycyrrhizin high producing strain	14.026
DRR006523	Root Summer glycyrrhizin low producing strain	19.078
DRR006524	Root Summer glycyrrhizin low producing strain	18.295
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.867
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.170

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.713
SRR2868004	Drought Stress (root)	24.062
SRR2967015	Control (root)	26.396

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	15.277
SRR9715740	Leaf	16.195
SRR9715741	Leaf	21.409
SRR9715739	Root	6.063
SRR9715742	Root	14.549
SRR9715743	Root	12.587

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.215
SRR8749028	MeJA induced 9h	17.045
SRR8749029	MeJA induced 9h	8.205
SRR8749030	Uninduced	14.053
SRR8749031	Uninduced	10.425
SRR8749032	Uninduced	8.995

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.830
SRR8400027	Control - Root	18.857